Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11k13
         (145 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   0.58 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   1.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   3.1  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    19   7.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    19   7.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    18   9.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    18   9.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 0.58
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 99  QKGRAGYVRLNGLHGVVSRPRAHGF*DPPTK 7
           Q+   GY       G   RP + G+  PPTK
Sbjct: 94  QEANLGYTNKMSTRG--KRPASPGYVQPPTK 122


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
          protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = -1

Query: 58 WCCEQTAGP 32
          WCC+   GP
Sbjct: 14 WCCDNLGGP 22


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = +1

Query: 49  HNTMQTVESHIPRAPLLRGDLVGG 120
           H+       H   APLL   L GG
Sbjct: 511 HHVAPPSGHHASSAPLLAATLAGG 534


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 142 FFSGRGPNLLRG 107
           FF G   N+LRG
Sbjct: 272 FFKGAFSNILRG 283


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 142 FFSGRGPNLLRG 107
           FF G   N+LRG
Sbjct: 272 FFKGAFSNILRG 283


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 12  WVGPKI 29
           WVGPK+
Sbjct: 84  WVGPKL 89


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 43  TAGPWILGP 17
           T G W LGP
Sbjct: 100 TGGTWELGP 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.131    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,512
Number of Sequences: 438
Number of extensions: 642
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 28
effective length of database: 134,079
effective search space used:  2547501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)