Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11j20
(558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 150 9e-37
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 104 6e-23
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 92 3e-19
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 77 1e-14
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 65 3e-11
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 65 4e-11
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 6e-11
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 62 2e-10
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 8e-09
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 57 8e-09
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 55 3e-08
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 54 6e-08
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 53 2e-07
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 52 2e-07
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 52 2e-07
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 52 3e-07
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 51 7e-07
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 49 3e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 48 4e-06
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 46 2e-05
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 45 5e-05
SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08) 44 8e-05
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 43 2e-04
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 42 3e-04
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 42 5e-04
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 40 0.001
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 39 0.002
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 39 0.003
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 38 0.006
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 38 0.007
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 37 0.010
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 37 0.013
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 35 0.039
SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 30 1.1
SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26) 30 1.5
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 29 1.9
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_18636| Best HMM Match : GPS (HMM E-Value=8.4) 29 2.6
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 28 5.9
SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1) 28 5.9
SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32) 28 5.9
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 27 7.9
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 150 bits (363), Expect = 9e-37
Identities = 71/102 (69%), Positives = 81/102 (79%)
Frame = +2
Query: 251 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 430
M+E+ ALTVQFV+G F+EKYDPTIEDFYRKEIEVDN+P +LEILDTAG
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAG 60
Query: 431 TEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITR 556
TEQFASMRDLYIKNGQGF++VYSL N QTF D+KPM+ I R
Sbjct: 61 TEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILR 102
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 104 bits (249), Expect = 6e-23
Identities = 57/102 (55%), Positives = 65/102 (63%)
Frame = +2
Query: 251 MREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 430
M+E+ ALTVQFV+G F+EKYDPTIEDFY TAG
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYH----------------TAG 44
Query: 431 TEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITR 556
TEQFASMRDLYIKNGQGF++VYSL N QTF D+KPM+ I R
Sbjct: 45 TEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILR 86
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 91.9 bits (218), Expect = 3e-19
Identities = 39/85 (45%), Positives = 61/85 (71%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
ALT+QF+ F+ YDPTIED YRK+ +D L+ILDTAG E+F++MR+ Y+++G+G
Sbjct: 26 ALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEFSAMREQYMRSGEG 85
Query: 482 FVVVYSLTNHQTFQDIKPMKELITR 556
F++V+S+T+ +F++I I R
Sbjct: 86 FLLVFSVTDRSSFEEINKFYNQILR 110
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 76.6 bits (180), Expect = 1e-14
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQ-FASMRDLYIKNGQ 478
AL V+F+ F+ +YDPTIED YRK I +D+ LEILDTA Q +RD +++ G
Sbjct: 20 ALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASRGQNSCKLRDQFVREGD 79
Query: 479 GFVVVYSLTNHQTFQDIKPMKELI 550
GF+VVYS + TF ++ ++++
Sbjct: 80 GFIVVYSTADRSTFANLHRYRDMM 103
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/92 (34%), Positives = 51/92 (55%)
Frame = +2
Query: 245 TIMREFXXXXXXXXXXXXXALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDT 424
T +R F +L ++F+ F + Y PTIEDF+ K + +N L+I+DT
Sbjct: 24 TSLRRFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDT 83
Query: 425 AGTEQFASMRDLYIKNGQGFVVVYSLTNHQTF 520
+GT +F +MR + I G FV+VYS + ++F
Sbjct: 84 SGTYEFPAMRKVDIAKGDAFVLVYSQDHPESF 115
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 64.9 bits (151), Expect = 4e-11
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNS-PCVLEILDTAGTEQFASMRDLYIKNGQ 478
+L +F+SG F E+Y PT+ D Y K + + LEI+DTAG+ F +M+ L I+N
Sbjct: 122 SLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSYPFPAMKKLTIQNAD 181
Query: 479 GFVVVYSLTNHQTFQD-IKPMKELI 550
FV+VYS+ + Q+ ++ +E++
Sbjct: 182 AFVLVYSVDEKASLQEALELQREIV 206
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
AL V+F +G F+ +YDPT+E Y +D P L I DTA T + +Y+ +G
Sbjct: 142 ALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTASTYE-----PVYLSQNEG 196
Query: 482 FVVVYSLTNHQTFQDIKPMKELI 550
F+VVYS+ +TF+ K + +LI
Sbjct: 197 FIVVYSINELRTFETAKQLVKLI 219
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/69 (37%), Positives = 45/69 (65%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
+LT+QFV G F++ YDPTIE+ + K I+ LE++DTAG ++++ Y G
Sbjct: 21 SLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDEYSIFPQSYSMGIHG 80
Query: 482 FVVVYSLTN 508
+++VY++T+
Sbjct: 81 YILVYAVTS 89
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
L QF G F PTI DF K ++VD L+I DTAG E+F S+ Y N G
Sbjct: 23 LVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYYHNADG 82
Query: 482 FVVVYSLTNHQTFQDI 529
+V Y +TN ++F+ +
Sbjct: 83 VIVTYDITNKKSFESL 98
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 57.2 bits (132), Expect = 8e-09
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 478
+L +F+ F EKY PTI DF K + +D+ L+I DTAG E+F + YI++ +
Sbjct: 178 SLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRDSE 237
Query: 479 GFVVVYSLTNHQTFQDI 529
++V+ +TN+ +F+ +
Sbjct: 238 AALIVFDITNYTSFESV 254
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 57.2 bits (132), Expect = 8e-09
Identities = 28/75 (37%), Positives = 48/75 (64%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
ALTV+F++ F+ +YD T+E YR++ EV +E+ DTAG A + + ++ G+
Sbjct: 876 ALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGENSPAKL-ERCLEIGEV 934
Query: 482 FVVVYSLTNHQTFQD 526
FVV+YS+T+ +F +
Sbjct: 935 FVVLYSITSRHSFDE 949
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/49 (44%), Positives = 38/49 (77%)
Frame = +2
Query: 410 EILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITR 556
+ILDTAG E++++MRD Y++ G+GF+ V+++ N ++F+DI +E I R
Sbjct: 280 DILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKR 328
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 55.2 bits (127), Expect = 3e-08
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 478
+L ++FV G F E + TI F + + +D++ EI DTAG E++ S+ +Y + Q
Sbjct: 36 SLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQ 95
Query: 479 GFVVVYSLTNHQTFQDIKP-MKEL 547
+VVY +TN TF K +KEL
Sbjct: 96 AAIVVYDITNQDTFARAKTWVKEL 119
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCV-LEILDTAGTEQFASMRDLYIKNG 475
+L QF G F E DPT+ DF+ + +E+ + L+I DTAG E+F S+ Y +N
Sbjct: 28 SLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYRNT 87
Query: 476 QGFVVVYSLTNHQTFQDI 529
G +++Y +TN +F ++
Sbjct: 88 VGCLIIYDITNRDSFVNV 105
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 54.0 bits (124), Expect = 8e-08
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +2
Query: 332 FMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTN 508
+ E Y TI DF + IE+D L+I DTAG E+F ++ Y + G +VVY +T+
Sbjct: 54 YTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD 113
Query: 509 HQTFQDIKPMKELITR 556
++F ++K + I R
Sbjct: 114 QESFNNVKQWLQEIDR 129
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = +2
Query: 449 MRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITR 556
MRDLY+KNGQGFV+VYS+T TF D++ ++E I R
Sbjct: 1 MRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQILR 36
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
+L V ++ F Y PT D Y +EV+ C++E DTAG E F ++R L +
Sbjct: 33 SLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQEDFDALRPLCYSSADV 92
Query: 482 FVVVYSLTNHQTFQDI 529
F+V +S+ + +F ++
Sbjct: 93 FIVCFSVVSPTSFANV 108
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/63 (39%), Positives = 42/63 (66%)
Frame = +2
Query: 368 YRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKEL 547
Y KE+ + +S L+ILDTAG + + YI NG GFVVVYS+T++ +++ + + +L
Sbjct: 4 YEKELRIGDSSMELDILDTAGNGEAS-----YIHNGDGFVVVYSITDYYSYEMARQLVKL 58
Query: 548 ITR 556
+T+
Sbjct: 59 VTQ 61
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
++ +F G F E+Y+PT+ED Y K + + S VL D++G+ QF +MR++ IK G
Sbjct: 23 SIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQFPAMREVAIKRASG 82
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 50.8 bits (116), Expect = 7e-07
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
+L F F EK+ PT++D++ + +D I+DTAGT F MR L I Q
Sbjct: 27 SLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAGTYAFPVMRRLAIHTCQA 86
Query: 482 FVVVYSLTNHQTFQD 526
F+VV+++ + +F++
Sbjct: 87 FIVVFAINSESSFRE 101
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 478
+L ++F F Y TI DF + + VD L+I DTAG E+F ++ Y ++
Sbjct: 23 SLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYRSAH 82
Query: 479 GFVVVYSLTNHQTFQDIKPMKELIT 553
G V++Y + +TF + E ++
Sbjct: 83 GIVLIYDVNESETFLHLSQWLEEVS 107
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +2
Query: 332 FMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTN 508
F Y TI DF + I +D L+I DTAG E+F ++ Y + G +VVY +T+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 509 HQTFQDIK 532
TF ++K
Sbjct: 62 ADTFVNVK 69
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 47.2 bits (107), Expect = 9e-06
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +2
Query: 305 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGF 484
L + + + F +Y PT+ D Y + + P L + DTAG E + +R L F
Sbjct: 19 LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVF 78
Query: 485 VVVYSLTNHQTFQDIK 532
+V +S+ + +F+++K
Sbjct: 79 LVCFSVVSPSSFENVK 94
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 362 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 532
+F + I+V+ ++ DTAG E++ ++ Y + G V+VY LT +TFQD++
Sbjct: 48 EFATRSIQVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVE 104
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 362 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMK 541
DF K + VD L++ DTAG E+F S+ Y + G +++Y +T +F D++
Sbjct: 478 DFQMKTLVVDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWV 537
Query: 542 ELI 550
E I
Sbjct: 538 EAI 540
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 478
+L ++F F TI DF K + V+ + L I DTAG E+F ++ Y + Q
Sbjct: 23 SLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYRGAQ 82
Query: 479 GFVVVYSLTNHQTFQDIK 532
G ++VY + +TF ++
Sbjct: 83 GVILVYDTNSRETFDKLE 100
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/57 (31%), Positives = 35/57 (61%)
Frame = +2
Query: 362 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 532
DF K + ++ L+I DTAG E++ ++ Y + GF+++Y +TN ++FQ ++
Sbjct: 57 DFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_33026| Best HMM Match : Ras (HMM E-Value=3.7e-08)
Length = 155
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/74 (28%), Positives = 42/74 (56%)
Frame = +2
Query: 305 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGF 484
LTV+F++ F+ +YDP +E YR + V ++++DTAG + D ++
Sbjct: 2 LTVRFITRRFIGEYDPCLEASYRHHLTVHGQYIAMDVVDTAG-KNTPDKVDALLEAANIV 60
Query: 485 VVVYSLTNHQTFQD 526
++YS+T+ +F++
Sbjct: 61 YLLYSVTDRASFEE 74
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 478
+L +FV G F + TI +F K++++D L+I DTAG E+F S+R + +
Sbjct: 226 SLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTPFYRGSD 285
Query: 479 GFVVVYSLTNHQTFQDIKPMKE 544
++VY++ + ++F ++ K+
Sbjct: 286 LCLLVYAVDDAKSFTNLSMWKK 307
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 430
ALTV+F++ F+ +YD T+E +R +++DN L+I DTAG
Sbjct: 31 ALTVRFLTRRFIGEYDQTLESTHRHILQIDNEDVSLDISDTAG 73
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +2
Query: 407 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 532
L++ DTAG E+F S+ + ++ GF++V+ LT+ Q+F +I+
Sbjct: 168 LQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIR 209
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQ 478
+L +F G F + T+ D + +++ L+ DTAG E+F + Y +N
Sbjct: 26 SLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYRNAD 85
Query: 479 GFVVVYSLTNHQTFQDI 529
++V+ +TN TF I
Sbjct: 86 AVILVFDITNRGTFASI 102
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 305 LTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQF-ASMRDLYIKNGQ 478
L + +G F E+ + TI DF+ K +E++ L++ DTAG E+F SM Y +N
Sbjct: 62 LAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERFRKSMVCHYYRNVN 121
Query: 479 GFVVVYSLTNHQTFQ 523
V +Y +T +F+
Sbjct: 122 AVVFMYDITRKCSFE 136
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 362 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 532
DF K + V+ +++ DTAG E+F S+ Y + G ++ Y +T +F ++K
Sbjct: 932 DFQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLK 988
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +2
Query: 305 LTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGF 484
L + F F E Y PT+ + Y +IEVD L + DTAG E + +R L +
Sbjct: 5945 LLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVI 6004
Query: 485 VVVYSLTNHQTFQDI 529
++ +S+ + + ++I
Sbjct: 6005 LMCFSIDSPDSLENI 6019
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 386 VDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKP-MKEL 547
V++ I DTAG E+F S+ LY ++ ++VY +T TF ++P ++EL
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIREL 58
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 362 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 529
+F K + V L+I DTAG E+F S+ Y + G ++VY +++ +TF +
Sbjct: 131 EFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2
Query: 407 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 529
L+I DTAG E+F ++ Y + G ++VY +TN ++F +I
Sbjct: 7 LQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI 47
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 320 VSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVY 496
++G F +KY T+ + + P + DTAG E+F +RD Y GQ ++++
Sbjct: 53 LTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMF 112
Query: 497 SLTNHQTFQDI 529
+T+ T++++
Sbjct: 113 DVTSRVTYKNV 123
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAG 430
A TV+ ++ F+ +YDP +E Y+ +E+D L++LDTAG
Sbjct: 196 AFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAG 238
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
A + + F +Y PT+ D Y I +D + + DTAG E + +R L
Sbjct: 20 AFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDYDRLRPLSYPMTDV 79
Query: 482 FVVVYSLTNHQTFQDIK 532
F+V + + + +F++I+
Sbjct: 80 FLVCFDIGSRTSFENIE 96
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 449 MRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELITR 556
MR+ Y++NG+GF+++YS+T+ +F K+ I R
Sbjct: 1 MREQYMRNGEGFIIIYSITDRSSFNLAAQYKDQIER 36
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQG 481
AL +V F EKY+ T+ + +EVD L + DT+G E + +R L N
Sbjct: 247 ALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHEDYDHVRPLSYNNVDI 306
Query: 482 FVVVYSLTNHQTFQDI 529
++ + ++ +T I
Sbjct: 307 VLICFDISRPKTADSI 322
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -1
Query: 366 KSSIVGSYFSIKHPDTNCTVNALF 295
KSSIVGSYFS P TNC VNA F
Sbjct: 1 KSSIVGSYFSTNCPVTNCKVNADF 24
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 37.1 bits (82), Expect = 0.010
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 407 LEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 529
L+I DTAG E+F ++ Y ++ G ++ Y +T TF+++
Sbjct: 97 LQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNV 137
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 36.7 bits (81), Expect = 0.013
Identities = 13/57 (22%), Positives = 33/57 (57%)
Frame = +2
Query: 362 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 532
DF+ + ++D L++ DTAG E++ ++ + + G ++V+ ++ ++F I+
Sbjct: 46 DFFIHDFDLDGKKVKLQLWDTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIR 102
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 35.1 bits (77), Expect = 0.039
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +2
Query: 353 TIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTF 520
++ D + + DN L I DTAG E++ S+ Y + QG +V+ +T TF
Sbjct: 385 SMNDIFWEYFLYDNKKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITF 440
>SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 368 YRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 532
YR + VD L+I+DTAG M + + F +VYS+T+ +F + +
Sbjct: 4 YRHHLIVDGQFISLDIMDTAGKNSVEKM-STCLTFAELFFIVYSVTDRTSFDEAR 57
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 31.9 bits (69), Expect = 0.37
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +2
Query: 392 NSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIK 532
++ C L +LDT+G E++ + +Y+KN V ++L + + ++
Sbjct: 60 SNSCHLYLLDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLE 106
>SB_4238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1288
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 216 HTML*KRIHTVRYKMSLLCWFMTHSDAITELHLLKLIDKHRRHFSSM*IKITPTA 52
+T + + + +R K S + + THSD ITE+ + K + S + IK+ P A
Sbjct: 178 NTKILEELVVLRKKRSDILGYATHSDYITEMRMSKSAANVSKFLSDLAIKLHPLA 232
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 302 ALTVQFVSGCFMEKYDPTIEDFYR 373
AL V+FV+G F+ +YDPT+ + R
Sbjct: 339 ALVVRFVTGRFLNEYDPTLGEHAR 362
>SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26)
Length = 550
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 347 DPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQD 526
DP ++D + V+NSP ++ + + T ++ + ++NGQ + + + + Q Q
Sbjct: 69 DPGVQDSAPNDGFVENSPTIVPVQNQQNTPLYSPLTQ--VENGQVYYAIVTNSPSQETQC 126
Query: 527 IKPMKEL 547
P EL
Sbjct: 127 CSPSPEL 133
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 29.5 bits (63), Expect = 1.9
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 425 AGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDI 529
AG E+F ++ Y + G ++VY +T +++ ++
Sbjct: 376 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL 410
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 428 GTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKELIT 553
G + M++ I G F++VYS+T+ Q+F DI + + +T
Sbjct: 73 GLTECQRMKEASILWGDAFLLVYSITSLQSFTDISCIIQQLT 114
>SB_18636| Best HMM Match : GPS (HMM E-Value=8.4)
Length = 513
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -3
Query: 334 KTS*YKLHSQRTLSDPTRTQHDHFKFAHYCAP*IT 230
KTS + + RT DPT++QH+ F F + +P +T
Sbjct: 364 KTSLFGVQPSRT-RDPTKSQHNGFAFVLHVSPPLT 397
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = +2
Query: 362 DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQ 523
D K +++ L + DTAG E+F ++ Y + ++++++ + + Q
Sbjct: 47 DSCSKFVKIGEKQVTLSVWDTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQ 100
>SB_24286| Best HMM Match : DUF1368 (HMM E-Value=4.1)
Length = 436
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 383 EVDNSPCVLEILDTAGTEQFASMRD 457
++ S C+LE+LD TE+ + MRD
Sbjct: 275 QILKSICILELLDVESTEKSSRMRD 299
>SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32)
Length = 670
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 317 FVSGC-FMEKYDPTIEDFYRKEIEVDNSPCVLEI 415
++ C FM + T +DF+ E+ ++++PC L++
Sbjct: 242 YLDDCYFMGEVSTTNDDFWSAEVFINHNPCTLKL 275
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 413 ILDTAGTEQFASMRDLYIKNGQGFVVVYSLTNHQTFQDIKPMKE 544
I DTAG E+F S+ + + V+V+ +T +F+ + ++
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRD 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,731,088
Number of Sequences: 59808
Number of extensions: 366326
Number of successful extensions: 858
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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