Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11j19
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   3.3  

>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 371 IPACRPNRCKPCPSYCTEPA-VCKP 442
           IP C P  C P P  C +PA VC P
Sbjct: 657 IPCCPPIPCCPQPKICCQPAPVCLP 681


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 371 IPACRPNRCKPCPSYCTEPA-VCKP 442
           IP C P  C P P  C +PA VC P
Sbjct: 302 IPCCPPIPCCPQPKICCQPAPVCLP 326


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 371 IPACRPNRCKPCPSYCTEPA-VCKP 442
           IP C P  C P P  C +PA VC P
Sbjct: 254 IPCCPPIPCCPQPKICCQPAPVCLP 278


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 371  IPACRPNRCKPCPSYCTEPA-VCKP 442
            IP C P  C P P  C +PA VC P
Sbjct: 982  IPCCPPIPCCPQPKICCQPAPVCLP 1006


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 374 PACRPNRCKPCPSYCTEPAVCKPQRC 451
           P   P  C P P  C  P +C PQ C
Sbjct: 31  PPPPPPMCAPPPLPCPPPPICPPQFC 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,681,861
Number of Sequences: 27780
Number of extensions: 251481
Number of successful extensions: 869
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)