Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11j19
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   6.9  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   6.9  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   6.9  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   6.9  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   9.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.2  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 16  ITSVIFFNFKIFRINYFNNLKINKNECSFLQ 108
           I S +  N+K    N +NN   N N    LQ
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 16  ITSVIFFNFKIFRINYFNNLKINKNECSFLQ 108
           I S +  N+K    N +NN   N N    LQ
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 16  ITSVIFFNFKIFRINYFNNLKINKNECSFLQ 108
           I S +  N+K    N +NN   N N    LQ
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 16  ITSVIFFNFKIFRINYFNNLKINKNECSFLQ 108
           I S +  N+K    N +NN   N N    LQ
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQ 111


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 73  LKINKNECSFLQLR 114
           L+IN+N C + +L+
Sbjct: 64  LRINRNRCQYCRLK 77


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 73  LKINKNECSFLQLR 114
           L+IN+N C + +L+
Sbjct: 113 LRINRNRCQYCRLK 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,368
Number of Sequences: 438
Number of extensions: 3251
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)