Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11j18
(647 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 62 1e-11
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 57 4e-10
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 57 4e-10
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 57 6e-10
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 56 1e-09
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 52 1e-08
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 49 1e-07
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 49 1e-07
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 47 4e-07
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 46 8e-07
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 45 2e-06
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 45 2e-06
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 43 1e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 39 1e-04
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 33 0.006
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 33 0.008
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 28 0.29
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 26 0.89
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 2.7
AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant r... 23 8.3
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 62.1 bits (144), Expect = 1e-11
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSI 466
+I GDFN+ HT WGS +N G ELL ++++ L ILN+GS PT + + S ID++
Sbjct: 119 VIAGDFNAWHTEWGSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTF 178
Query: 465 CTPQLASSLSWSTLCSTYNSDH 400
TP L +W L SDH
Sbjct: 179 ATPSLVLHDTWEVL-DFARSDH 199
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 57.2 bits (132), Expect = 4e-10
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPG-EVISAIDLSI 466
+I GDFN+ H WGS ++ G ELL + L +LN G+ + G S +D++
Sbjct: 120 VIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAF 179
Query: 465 CTPQLASSLSWSTLCSTYN-SDH 400
TP +A +W+ +C Y+ SDH
Sbjct: 180 ATPTIAQPGTWN-VCGDYSYSDH 201
Score = 27.5 bits (58), Expect = 0.39
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 164 ELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
ELK + + + APG DGIP + + + F L L+ G P +W+
Sbjct: 417 ELKLIARRMANKKAPGLDGIPNAAVKAAILEHTGVFTALYQDCLVNGTFPAAWK 470
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 57.2 bits (132), Expect = 4e-10
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGS-PTRLTKPGEVISAIDLSI 466
+I GDFN+ HT WGS+ ++ G +LL ++ L ++NSG+ PT + + S ID+
Sbjct: 139 VIDGDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCF 198
Query: 465 CTPQLASSLSWSTLCSTYNSDHYPIIIS 382
TP +A +W + SDH I S
Sbjct: 199 ATPSIARPETWE-VHEFARSDHQLITYS 225
Score = 33.5 bits (73), Expect = 0.006
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = -1
Query: 299 LPIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLGELKGVLNHVK-DSAP 123
+P E L R+ P + P+ + + D+ +S T EL+ + H+ AP
Sbjct: 394 VPPETDPVELGRIVTDLFPTHPPVYWPETDDVDSGASDFDRVTPEELQEIAAHMAIRKAP 453
Query: 122 GEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
G DGIP + + EK F + L TG P W+
Sbjct: 454 GLDGIPNAAVKVAIEKYPGVFCRVYQDCLNTGTFPQQWK 492
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 56.8 bits (131), Expect = 6e-10
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -3
Query: 633 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDLSICTP 457
GDFN+ H +WGS+ + G ELL+ ++ L +LN G+ + T G S ID++ +P
Sbjct: 120 GDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASP 179
Query: 456 QLASSLSWSTLCSTYNSDH 400
+ +W L S + SDH
Sbjct: 180 SIVRYNTWEVLKSYWYSDH 198
Score = 25.0 bits (52), Expect = 2.1
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 128 APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
APG DGIP L +K F ++ G+ P W+
Sbjct: 450 APGLDGIPNIALKTAIKKHTAVFRSIYQGCFDRGEFPAHWK 490
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 55.6 bits (128), Expect = 1e-09
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSIC 463
+I GDFN+ T WGS +N+ G +L+ +L ++N G + S IDL+ C
Sbjct: 116 IISGDFNAWATEWGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVRNSRT-SIIDLTFC 174
Query: 462 TPQLASSLSWSTLCSTYNSDH 400
+P LASS++W + SDH
Sbjct: 175 SPALASSMNWRVSNAYTLSDH 195
Score = 32.3 bits (70), Expect = 0.014
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 182 LTFTLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
++ + E++ +H+K APG DGIP + + L FL++ TG P W+
Sbjct: 391 VSISADEIQKAADHLKLGKAPGPDGIPIEAIKAAIKAYLEAFLSVFQNCFDTGFFPIPWK 450
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 52.4 bits (120), Expect = 1e-08
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSI 466
++ GDFN+ H WGS + G ELL ++ L ILN G PT + + S ID+S
Sbjct: 182 VVAGDFNAWHEEWGSGRNGQRGIELLQTVETLGLSILNQGRKPTFIGRGFAASSVIDVSF 241
Query: 465 CTPQLASSLSWSTLCSTYNSDH 400
+ ++ +WS + + SDH
Sbjct: 242 ASREIVRPDTWSVIPFS-RSDH 262
Score = 32.7 bits (71), Expect = 0.010
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = -1
Query: 272 LDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLG--ELKGVL-NHVKDSAPGEDGIPY 102
L+R+ P + P+ S+ +SDAP+++ + EL + V APG DGIP
Sbjct: 456 LERIVSDLFPTHPPV-SWP-VSSDAPTTVPSDSRVEPQELLSIAAGMVTRKAPGLDGIPN 513
Query: 101 SFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
+ + E+ F L L G PP W+
Sbjct: 514 AAVKVAIEEYTEEFCRLYQDCLSRGTFPPQWK 545
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 48.8 bits (111), Expect = 1e-07
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVI-SAIDLSI 466
++ GDFN+ H WGS + G EL +++ L ++N G G + S +D++
Sbjct: 130 VVAGDFNARHEEWGSPRTCDRGEELHGMVEQLGLIVINQGREYTFVGNGVALPSIVDVAF 189
Query: 465 CTPQLASSLSWSTLCSTYNSDH 400
+P +A +W S SDH
Sbjct: 190 ASPSIARPDTWVVSTSYTASDH 211
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 48.8 bits (111), Expect = 1e-07
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPG-EVISAIDLSI 466
++ GDFN+ H WGS SN G LL+ L ++N G+ G S +D++
Sbjct: 176 VVAGDFNAWHEEWGSRRSNERGEVLLEASQQLGLLLMNRGNVATFVGNGVATASVVDVTF 235
Query: 465 CTPQLASSLSWSTLCSTYNSDHYPIIIS 382
+ +A +W + SDH I S
Sbjct: 236 ASSSIAQPSTWLVRNTDTRSDHRYITYS 263
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 47.2 bits (107), Expect = 4e-07
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEV-ISAIDL-- 472
++ GDFN+ HT+WGS + G LL +++ L +LN G+ G S ID+
Sbjct: 117 LLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAF 176
Query: 471 ---SICTPQLA--SSLSWSTLCSTYNSDH 400
SIC P LA S+ W L SDH
Sbjct: 177 ASPSICRPDLAANSATCWRILSRYSYSDH 205
Score = 24.2 bits (50), Expect = 3.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 440 REDANWGVQMDRSMALITS 496
+ + NW V D+S+A++TS
Sbjct: 40 QNNGNWVVDRDKSVAIVTS 58
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 46.4 bits (105), Expect = 8e-07
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNS------YGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 484
F+I GDFN+ SW + + G +L +LN GS PG S
Sbjct: 114 FVIGGDFNAWSASWNNQLGERGETQKRRGELVLSTFAQIDAILLNDGSTPTYVGPGRT-S 172
Query: 483 AIDLSICTPQLASSLSWSTLCSTYNSDHYPIII 385
+DL+ + +A S W L S NSDH I I
Sbjct: 173 VVDLTFASRTVARSFKWEVLSSYMNSDHRAIRI 205
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 45.2 bits (102), Expect = 2e-06
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVS------NSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 484
F++ GDFN+ +SW +++ G LL + ++N+G T +T E S
Sbjct: 116 FVVAGDFNAWSSSWANTLGARGESQRLRGDTLLAAFAGLEMVLMNNGQDTFVTP--ERKS 173
Query: 483 AIDLSICTPQLASSLSWSTLCSTYNSDHYPIIIS 382
AIDL+ + L + W L NSDH I+I+
Sbjct: 174 AIDLTFVSQSLMETTGWEVLPDYMNSDHIGILIT 207
Score = 29.5 bits (63), Expect = 0.096
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = -1
Query: 290 ELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLGELKGVLNHVKD-SAPGED 114
E + +D L P S P+ D + + P S+ T E++ + +K PG D
Sbjct: 368 EKLNTIIDELFP-SHPVTDWPTHQPTTSQENPESV----TDEEIRNIGRSLKSRKVPGPD 422
Query: 113 GIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
GIP + L+ + F + + L TG P +W+
Sbjct: 423 GIPNAALATAMIEEPTIFKKVYQRCLDTGVFPDNWK 458
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 45.2 bits (102), Expect = 2e-06
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSIC 463
+I GDFN+ WGS +NS G +L+ + + N+G+ + + S +D++ C
Sbjct: 114 VIAGDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAGTTPTFNR-NKRTSIVDITFC 172
Query: 462 TPQLASSLSWSTLCSTYNSDH 400
+ L+ L+W + SDH
Sbjct: 173 STTLSERLNWRVSDALTLSDH 193
Score = 31.5 bits (68), Expect = 0.024
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -1
Query: 203 DAPSSLNLTFTLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLNLINKILLTG 27
+ P + + T E+ + N +K APG DGIP + + F N++ L TG
Sbjct: 445 NTPETDPVPITRQEIINLANRLKCGKAPGIDGIPNMAIKAAMLAYPDVFKNVLMNTLTTG 504
Query: 26 DIPPSWR 6
P W+
Sbjct: 505 QFPSMWK 511
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 42.7 bits (96), Expect = 1e-05
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -3
Query: 633 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSICTP 457
GD N+ HT+WGS +N+ G ++ ++D L +LN+G +PT L S +D++ +
Sbjct: 120 GDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVAFASS 179
Query: 456 QLA 448
+A
Sbjct: 180 SIA 182
Score = 26.6 bits (56), Expect = 0.68
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 128 APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
APG DG+P + L+ K + F L + L P W+
Sbjct: 436 APGLDGVPNAALTAAIRKHTDIFKKLFQECLDNERFPDEWK 476
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 39.1 bits (87), Expect = 1e-04
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILN 529
++ GDFN+ H WGSS + G ELL + D L +LN
Sbjct: 118 LLAGDFNAMHLDWGSSRTCPKGLELLQLADNLGLVLLN 155
Score = 23.4 bits (48), Expect = 6.3
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = -1
Query: 296 PIELADQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLGELKGVLNHVKDSAPGE 117
P EL + +D L P P+ P L N S+ LT L ++ ++ K APG
Sbjct: 389 PAELR-RIVDALFPVHPPVEWPDLGVG--NMAPLRSIGLT-ELDQIAASMHPRK--APGL 442
Query: 116 DGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
DG+P + L+ + F + + L P W+
Sbjct: 443 DGVPNAALTVALRQQPEPFRRVFQECLDMSCFPQPWK 479
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 33.5 bits (73), Expect = 0.006
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = -1
Query: 290 ELADQFLDRLAPPSAP-LNDP-ILSYKQYNSDAPS-SLNLTFTLGELK-GVLNHVKDS-A 126
E+ + F DR A +P +ND + N+ A + +++ F E+ L +K S A
Sbjct: 499 EMCNLFADRFADCFSPAMNDTDTIDAALVNTPAGAINMSTPFIDSEIVLSALAQLKPSFA 558
Query: 125 PGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
PG DGIP + L L N L G P +WR
Sbjct: 559 PGPDGIPSTVLKRCQTTVAPILAKLFNASLANGYFPKAWR 598
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 33.1 bits (72), Expect = 0.008
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 585 SYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSICTPQLASSLSWSTLCSTYNS 406
S G ++D L +LN G+ + S +D+S C+P L +W +C S
Sbjct: 145 SRGGVVMDAAAALGLVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNW-RVCDETPS 203
Query: 405 DHYPI 391
DH I
Sbjct: 204 DHNTI 208
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 27.9 bits (59), Expect = 0.29
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 125 PGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWRS 3
PG DGIP S L + + + + N L G P W+S
Sbjct: 488 PGPDGIPASVLINCKDVLAPHLAKIFNLSLSLGVFPALWKS 528
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 26.2 bits (55), Expect = 0.89
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 173 TLGE-LKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSW 9
T GE L + N +PG DGIP F + + L L+ L G+IP S+
Sbjct: 445 TSGEILYAIKNSQSRKSPGPDGIPKEFYLRAFDV-IERELGLVLNEALRGEIPRSF 499
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 24.6 bits (51), Expect = 2.7
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 432 STLCSTYNSDHYPIIISFP*NTCYCHMAKYQKI*ISCQSF*RIVA 298
STL T+N Y + + +P T YC ++++ I C S ++A
Sbjct: 135 STLNVTFNYT-YMLYLDWPFGTMYCKISQFVAILSICASVFTLMA 178
>AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant
receptor Or2 protein.
Length = 378
Score = 23.0 bits (47), Expect = 8.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 385 FISLKHMLLSYGEISKDLDQLSILLTHCCCL 293
F LK L + +I + + L+ L+TH C L
Sbjct: 227 FAELKECLKYHKQIIQYVHDLNSLVTHLCLL 257
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,368
Number of Sequences: 2352
Number of extensions: 14379
Number of successful extensions: 53
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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