BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11j18
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 32 2.0
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 32 2.0
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 32 2.0
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 32 2.0
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 32 2.0
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 32 2.0
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 32 2.0
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 32 2.0
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 31 2.7
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 31 2.7
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 31 2.7
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 31 2.7
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 31 2.7
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 31 2.7
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 30 8.2
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 30 8.2
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 91 NQEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 150
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 151 EGILPNSF 158
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 31.9 bits (69), Expect = 2.0
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTDEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRRITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTDEFYQRYKEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L I
Sbjct: 359 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEK 418
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 419 EGILPNSF 426
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L
Sbjct: 442 NQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSTEK 501
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 502 EGILPNSF 509
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -1
Query: 209 NSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILL 33
N + SLN T E+ ++N + +PG DG F E+ + + L L
Sbjct: 14 NQEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSTEK 73
Query: 32 TGDIPPSW 9
G +P S+
Sbjct: 74 EGILPNSF 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,927,498
Number of Sequences: 237096
Number of extensions: 1918804
Number of successful extensions: 3325
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3325
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -