Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11j18
(647 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 69 5e-12
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 67 2e-11
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 53 3e-07
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 53 3e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 51 1e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 45 8e-05
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 42 7e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 41 0.001
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 41 0.001
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 41 0.002
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 40 0.002
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 40 0.002
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 40 0.002
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 40 0.002
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 40 0.002
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 39 0.007
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 38 0.012
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 38 0.016
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 37 0.021
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 37 0.021
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 37 0.021
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 37 0.021
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 37 0.021
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 30 3.1
BT010287-1|AAQ23605.1| 831|Drosophila melanogaster LD40663p pro... 30 3.1
AE013599-2854|AAF57580.2| 831|Drosophila melanogaster CG7417-PA... 30 3.1
AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA... 29 5.4
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 68.9 bits (161), Expect = 5e-12
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSIC 463
++LGD NS WGS +N+ G ++ ++ SL +LN GSPT L+ + ID+S+
Sbjct: 131 ILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLS-THNTFTHIDISLI 189
Query: 462 TPQLASSLSWSTLCSTYNSDHYPIII 385
+PQ+A SWS + + SDH+PI I
Sbjct: 190 SPQIAHMCSWSISDNLHGSDHFPITI 215
Score = 48.4 bits (110), Expect = 8e-06
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = -1
Query: 206 SDAPSSLNLTFTLGELKGVLNHVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLINKILLTG 27
S + +SL+ FTL E++ + K +PG D + Y L +L L++ N+IL TG
Sbjct: 427 SPSATSLDSNFTLLEIENSVAKAKGKSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTG 486
Query: 26 DIPPSWRS 3
P +WRS
Sbjct: 487 KYPHTWRS 494
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSIC 463
+I GDFN H WGS +N G +D L +LN SPT + + IDL++C
Sbjct: 127 LITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHFS-THNTYTHIDLTLC 185
Query: 462 TPQLASSLSWSTLCSTYNSDHYPIIIS-FP 376
+P LA W L + SDH+PII + FP
Sbjct: 186 SPILAPHAKWKILNDLHGSDHFPIITTLFP 215
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 53.2 bits (122), Expect = 3e-07
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSI 466
F+I GDFNS H +W + +N +G L ++ D+ IL PT + A L +
Sbjct: 156 FLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKAKASTLDL 214
Query: 465 CTPQLASSLSWSTLCSTYNSDHYPIIISFP*N 370
C + + L+ + +SDH P++I + N
Sbjct: 215 CLTNIPNQLANPAVMQELSSDHLPVVIKYSTN 246
Score = 36.3 bits (80), Expect = 0.036
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 143 HVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
H + S PG DGIP L +L +N+ +N+ N L G P W+
Sbjct: 474 HTRKS-PGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWK 518
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 53.2 bits (122), Expect = 3e-07
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISAIDLSI 466
F+I GDFNS H +W + +N +G L ++ D+ IL PT + A L +
Sbjct: 104 FLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQPTYIPH-NHKAKASTLDL 162
Query: 465 CTPQLASSLSWSTLCSTYNSDHYPIIISFP*N 370
C + + L+ + +SDH P++I + N
Sbjct: 163 CLTNIPNQLANPAVMQELSSDHLPVVIKYSTN 194
Score = 36.3 bits (80), Expect = 0.036
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 143 HVKDSAPGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
H + S PG DGIP L +L +N+ +N+ N L G P W+
Sbjct: 422 HTRKS-PGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWK 466
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLS 469
+++ GD+N+ H WG + ++ G EL + L + IL +GSPTR P S ID +
Sbjct: 133 YLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCIDFA 192
Query: 468 ICTPQLASSLSWSTLCSTYNSDHYPIIIS 382
+ + L+ T +SDH P+IIS
Sbjct: 193 V-YHGIPDHLATITQSWDLDSDHLPLIIS 220
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 45.2 bits (102), Expect = 8e-05
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSG-SPTRLTKPGEVISAIDLSI 466
+I GD N+ T WGS +SN+ G ++D +++ L +LN G PT G S ID++
Sbjct: 121 VIGGDLNAWATEWGSRISNTRGRAVIDAMNLLDLVLLNDGFKPTFNNDRG--TSFIDVTF 178
Query: 465 CTPQLASSLSWSTLCSTYNSDH 400
+ L + +W SDH
Sbjct: 179 VSRVLVAGSNWMVHEDITLSDH 200
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 41.9 bits (94), Expect = 7e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLD--ILDMYSLCILNSGSPTRLTKP-GEVISAID 475
F+ GD+N+ HT WGS + N G +L I L ++ GSPT ++ ID
Sbjct: 132 FIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLID 191
Query: 474 LSICTPQLASSLSWSTLCSTYNSDHYPIII 385
++ T ++ SL + +SDH P++I
Sbjct: 192 FAV-TKNISRSLVKAECLPDLSSDHSPVLI 220
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTRL-TKPGEVISAID 475
F+ GD+N+ HT WGS + + G +L + L L ++ G PT P ++ ID
Sbjct: 131 FIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLID 190
Query: 474 LSICTPQLASSLSWSTLCSTYNSDHYPIIIS 382
+I T + ++ + + +SDH P+ ++
Sbjct: 191 FAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 41.1 bits (92), Expect = 0.001
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Frame = -1
Query: 356 IWRNIKRFRSAVNPSNALLLP--------IELADQFLDRLAPPSAPLN---DPILSYKQY 210
+WR KRF++ P +A+ P +E + F + L P N + + +
Sbjct: 166 LWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAPESLCRQVEE 225
Query: 209 NSDAPSSLNL---TFTLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLNLINK 42
++P ++L TL E+K ++ + APGED + + L ++ L + + + N
Sbjct: 226 YLESPFQMSLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLVLIFNS 285
Query: 41 ILLTGDIPPSWRS 3
+L G P +W+S
Sbjct: 286 VLDVGYFPKAWKS 298
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 40.7 bits (91), Expect = 0.002
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDM--YSLCILNSGSPTRL-TKPGEVISAID 475
F+ GD+N+ HT WGS + G +L + L L ++ G PT P ++ ID
Sbjct: 131 FIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWPADPRKIPDLID 190
Query: 474 LSICTPQLASSLSWSTLCSTYNSDHYPIIIS 382
+I T + ++ + + +SDH P+ ++
Sbjct: 191 FAI-TKHVPRNMVTAEALADLSSDHSPVFLN 220
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Frame = -1
Query: 356 IWRNIKRFRSAVNPSNALLLP--------IELADQFLDRLAPPSAPLN---DPILSYKQY 210
+WR KRF++ P +A+ P +E + F + L P N + + +
Sbjct: 364 LWRITKRFKAQPTPKSAIKNPSGGWCRTSLEKTEVFANNLEQRFTPYNYAPESLCRQVEE 423
Query: 209 NSDAPSSLNLTF---TLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLNLINK 42
++P ++L TL E+K ++ + APGED + + L ++ L + + N
Sbjct: 424 YLESPFQMSLPLSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLALIFNS 483
Query: 41 ILLTGDIPPSWRS 3
+L G P +W+S
Sbjct: 484 VLDVGYFPKAWKS 496
Score = 37.1 bits (82), Expect = 0.021
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLT-KPGEVISAIDLS 469
F+ GD+N+ H WG+ S G L +++ +L +G PT + P SA+D
Sbjct: 133 FIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFF 192
Query: 468 ICTPQLASSLSWSTLCSTYNSDHYPII 388
I L TL +SDH PI+
Sbjct: 193 ITCGYGMGRLDVQTL-QELSSDHLPIL 218
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 221 YKQYNSDAPSSLNLTF---TLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLN 54
+K N+ S N F TL EL G++N ++ APG D + + +L K Y +
Sbjct: 20 FKSLNASGESG-NSNFKPVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLIL 78
Query: 53 LINKILLTGDIPPSWR 6
+ N IL TG P W+
Sbjct: 79 IYNNILRTGHFPNKWK 94
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 221 YKQYNSDAPSSLNLTF---TLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLN 54
+K N+ S N F TL EL G++N ++ APG D + + +L K Y +
Sbjct: 467 FKSLNASGESG-NSNFKPVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLIL 525
Query: 53 LINKILLTGDIPPSWR 6
+ N IL TG P W+
Sbjct: 526 IYNNILRTGHFPNKWK 541
Score = 35.1 bits (77), Expect = 0.083
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N H WG+ +S + G L IL L I+ +G T + SA+D
Sbjct: 152 FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDF 211
Query: 471 SICTPQLASSL-SWSTLCSTYNSDHYPIII 385
+IC L ++ST +SDH PI I
Sbjct: 212 AICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 221 YKQYNSDAPSSLNLTF---TLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLN 54
+K N+ S N F TL EL G++N ++ APG D + + +L K Y +
Sbjct: 467 FKSLNASGESG-NSNFKPVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLIL 525
Query: 53 LINKILLTGDIPPSWR 6
+ N IL TG P W+
Sbjct: 526 IYNNILRTGHFPNKWK 541
Score = 35.1 bits (77), Expect = 0.083
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N H WG+ +S + G L IL L I+ +G T + SA+D
Sbjct: 152 FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDF 211
Query: 471 SICTPQLASSL-SWSTLCSTYNSDHYPIII 385
+IC L ++ST +SDH PI I
Sbjct: 212 AICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = -1
Query: 221 YKQYNSDAPSSLNLTF---TLGELKGVLNHVK-DSAPGEDGIPYSFLSHLGEKGLNYFLN 54
+K N+ S N F TL EL G++N ++ APG D + + +L K Y +
Sbjct: 467 FKSLNASGESG-NSNFKPVTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLIL 525
Query: 53 LINKILLTGDIPPSWR 6
+ N IL TG P W+
Sbjct: 526 IYNNILRTGHFPNKWK 541
Score = 35.1 bits (77), Expect = 0.083
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYEL-LDILDMYSLCILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N H WG+ +S + G L IL L I+ +G T + SA+D
Sbjct: 152 FILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDF 211
Query: 471 SICTPQLASSL-SWSTLCSTYNSDHYPIII 385
+IC L ++ST +SDH PI I
Sbjct: 212 AICKGFHTQKLKTYST--DELSSDHLPIQI 239
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 38.7 bits (86), Expect = 0.007
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVISA-IDLS 469
F++ GD+N+ H WG+ SN G L +++ + L +G PTR ID +
Sbjct: 132 FIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPGYIDFA 191
Query: 468 ICTPQLASSLSWSTLCSTYNSDHYPIIIS 382
+ L + S + +SDH P++I+
Sbjct: 192 LTKGVLGIHANISAVVE-LSSDHLPLVIT 219
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 37.9 bits (84), Expect = 0.012
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -1
Query: 281 DQFLDRLAPPSAPLNDPILSYKQYNSDAPSSLNLTFTLGELKGVLNHVKDS-APGEDGIP 105
D +DR+ + + +L+ + + P N TL EL + ++K+S APG+D I
Sbjct: 448 DYHIDRVNTGLRIIKESMLTERHNLNKNPH--NQPITLKELNDEIKNLKNSKAPGKDLIT 505
Query: 104 YSFLSHLGEKGLNYFLNLINKILLTGDIPPSWR 6
+ L K Y + + N IL G P +W+
Sbjct: 506 NQLIKTLPTKATLYLILIYNSILRLGYYPEAWK 538
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N+ H WG + + G L + + S I+ +G T + SAID
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDF 207
Query: 471 SICTPQLASSLSWSTLCSTYNSDHYPIII 385
SIC L + + +SDH PI++
Sbjct: 208 SIC-KGLGRFEKRISSGADLSSDHLPILL 235
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -3
Query: 642 MILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDLS 469
++ GD+N+ H WG + G L D + S+ I+ +GS T + SAID S
Sbjct: 161 ILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFS 220
Query: 468 ICTPQLASSLSWSTLCSTYNSDHYPIII 385
IC +L + + +SDH PI++
Sbjct: 221 IC-KRLGRYEKRISSSAHLSSDHLPILL 247
Score = 37.5 bits (83), Expect = 0.016
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 185 NLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSW 9
N TL EL + ++K+S APG+D I + L K Y + + N IL G P +W
Sbjct: 490 NQPITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAW 549
Query: 8 R 6
+
Sbjct: 550 K 550
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 37.1 bits (82), Expect = 0.021
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 185 NLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSW 9
N TL EL + ++K+S APG+D I + L K Y + + N IL G P +W
Sbjct: 362 NQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAW 421
Query: 8 R 6
+
Sbjct: 422 K 422
Score = 35.5 bits (78), Expect = 0.063
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N+ H WG + + G L + + + I+ +G T + SAID
Sbjct: 32 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 91
Query: 471 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 346
SIC +L +S S + +SDH PI++ +T + K
Sbjct: 92 SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSTLFLQK 132
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.1 bits (82), Expect = 0.021
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 185 NLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSW 9
N TL EL + ++K+S APG+D I + L K Y + + N IL G P +W
Sbjct: 478 NQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAW 537
Query: 8 R 6
+
Sbjct: 538 K 538
Score = 35.5 bits (78), Expect = 0.063
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N+ H WG + + G L + + + I+ +G T + SAID
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 207
Query: 471 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 346
SIC +L +S S + +SDH PI++ +T + K
Sbjct: 208 SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSTLFLQK 248
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.1 bits (82), Expect = 0.021
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 185 NLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSW 9
N TL EL + ++K+S APG+D I + L K Y + + N IL G P +W
Sbjct: 478 NQPITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAW 537
Query: 8 R 6
+
Sbjct: 538 K 538
Score = 34.7 bits (76), Expect = 0.11
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N+ H WG + + G L + + + I+ +G T + SAID
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 207
Query: 471 SICTPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 346
SIC L + + +SDH PI++ +T + K
Sbjct: 208 SIC-KGLGRLEKRISSVADLSSDHLPILLEINLDTSTLFLQK 248
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 37.1 bits (82), Expect = 0.021
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 185 NLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSW 9
N TL EL + ++K+S APG+D I + L K Y + + N IL G P +W
Sbjct: 440 NQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAW 499
Query: 8 R 6
+
Sbjct: 500 K 500
Score = 35.5 bits (78), Expect = 0.063
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N+ H WG + + G L + + + I+ +G T + SAID
Sbjct: 110 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 169
Query: 471 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 346
SIC +L +S S + +SDH PI++ +T + K
Sbjct: 170 SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSNLFLQK 210
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.1 bits (82), Expect = 0.021
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 185 NLTFTLGELKGVLNHVKDS-APGEDGIPYSFLSHLGEKGLNYFLNLINKILLTGDIPPSW 9
N TL EL + ++K+S APG+D I + L K Y + + N IL G P +W
Sbjct: 478 NQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAW 537
Query: 8 R 6
+
Sbjct: 538 K 538
Score = 35.5 bits (78), Expect = 0.063
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLC-ILNSGSPTRLT-KPGEVISAIDL 472
F++ GD+N+ H WG + + G L + + + I+ +G T + SAID
Sbjct: 148 FILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDF 207
Query: 471 SIC--TPQLASSLSWSTLCSTYNSDHYPIIISFP*NTCYCHMAK 346
SIC +L +S S + +SDH PI++ +T + K
Sbjct: 208 SICKGLGRLEKRISSS---ADLSSDHLPILLEINLDTSNLFLQK 248
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 645 FMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPT 514
F+ GD+N+ H WG+ S G L +++ +L +G PT
Sbjct: 133 FIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPT 176
>BT010287-1|AAQ23605.1| 831|Drosophila melanogaster LD40663p
protein.
Length = 831
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 254 PSAPLNDPILSYKQYNSDAPSSLNLT 177
P+AP++ P+ + Q++S AP+S LT
Sbjct: 660 PAAPISQPVQDFGQHHSSAPTSACLT 685
>AE013599-2854|AAF57580.2| 831|Drosophila melanogaster CG7417-PA
protein.
Length = 831
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 254 PSAPLNDPILSYKQYNSDAPSSLNLT 177
P+AP++ P+ + Q++S AP+S LT
Sbjct: 660 PAAPISQPVQDFGQHHSSAPTSACLT 685
>AE014134-3392|AAF53993.2| 241|Drosophila melanogaster CG2042-PA
protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -3
Query: 633 GDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRLTKPGEVIS 484
GD+N+ H WG+ N G L +++ + L +G P R + + ++
Sbjct: 57 GDWNTSHWLWGAERCNRRGRALANLVLSTGMSSLVTGGPKRFQEAVDTLT 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,617,180
Number of Sequences: 53049
Number of extensions: 570610
Number of successful extensions: 1282
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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