Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11j11
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 24 1.6
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.1
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.1
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 3.7
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 3.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 4.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 6.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 8.6
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 479 KELSRVIGGINTTVSENEGNLVLGVK 556
K SR++GG NT + NE ++ G+K
Sbjct: 156 KNPSRIVGGTNTGI--NEFPMMAGIK 179
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 147 ISCWFAFAWTVPILVF*LFY 88
++C F +A+ +P++ LFY
Sbjct: 221 VTCIFIWAYVIPLIFIILFY 240
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 147 ISCWFAFAWTVPILVF*LFY 88
++C F +A+ +P++ LFY
Sbjct: 221 VTCIFIWAYVIPLIFIILFY 240
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 24 KIIFKIPNYSFHPTNNQPLNTHKTIKK 104
KII + N + H NN N + KK
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNCKK 106
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 24 KIIFKIPNYSFHPTNNQPLNTHKTIKK 104
KII + N + H NN N + KK
Sbjct: 80 KIISSLSNKTIHNNNNYNNNNYNNYKK 106
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -2
Query: 501 PMTRDSSLT*NVTSSPSGVDPGPDDTSMNTPMSRKQPIESRARRTL*ALTITSSKSV 331
P +RD S T N + + D GP+ +N + Q I+ R L + T+S V
Sbjct: 85 PDSRDKSNTSNTSKTIILSDKGPEGIQINA--TELQKIKLEIHRDLPGKSTTTSVEV 139
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 57 HPTNNQPLNTHKTIKKPKWA-LSTRRQTSTI 146
HPT+N P++ + KP++ T + +ST+
Sbjct: 1389 HPTDNAPIHGYTIHYKPEFGDWDTAQISSTV 1419
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 501 PMTRDSSLT*NVTSSPSGVDPGPDDTSMNTPMSRKQPIE 385
P +RD S T N + + D GP+ +N +K +E
Sbjct: 85 PDSRDRSNTSNTSKTVILSDKGPEGIQINATELQKIKLE 123
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 558 IFTPKTKFPSFSLTVVFI 505
+FTP + P+ LT VF+
Sbjct: 63 LFTPGQELPARGLTAVFL 80
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 159 PESPISCWFAFAWTVPILV 103
P SP++ W++ A + P LV
Sbjct: 426 PISPLNDWYSLASSWPALV 444
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 91 KQLKNQNGHCPREGKPARYW 150
+Q + Q H P E +PA W
Sbjct: 455 QQQQQQQQHWPMEEEPAASW 474
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,839
Number of Sequences: 438
Number of extensions: 4628
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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