Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11j08
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456355-1|CAG30241.1| 276|Homo sapiens Em:AC006547.3 protein. 64 6e-10
BC041339-1|AAH41339.1| 276|Homo sapiens chromosome 22 open read... 62 2e-09
AK057461-1|BAB71498.1| 273|Homo sapiens protein ( Homo sapiens ... 59 1e-08
AK092484-1|BAC03902.1| 214|Homo sapiens protein ( Homo sapiens ... 50 1e-05
BC044216-1|AAH44216.2| 488|Homo sapiens BAG5 protein protein. 30 8.7
AB020680-1|BAA74896.1| 466|Homo sapiens KIAA0873 protein protein. 30 8.7
>CR456355-1|CAG30241.1| 276|Homo sapiens Em:AC006547.3 protein.
Length = 276
Score = 63.7 bits (148), Expect = 6e-10
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Frame = +1
Query: 121 MCILFV-YNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXT 297
MCI+F ++ + + Y LI+A NRDEFY RPS W +N I+ T
Sbjct: 1 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60
Query: 298 WLAVSPLRKKMGVLLN-LPNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNF 474
WL +S R K+ L N L A+ RG++V F+ + ++ SY++++ N F
Sbjct: 61 WLGIS-TRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGF 119
Query: 475 IFVAMDFGNTT-PVINSFTNVTNSITTHTDP-CLGFGNSLPDMPLKKV 612
+A D VI + N P G N+L + P +K+
Sbjct: 120 NLIAADLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKL 167
>BC041339-1|AAH41339.1| 276|Homo sapiens chromosome 22 open reading
frame 25 protein.
Length = 276
Score = 61.7 bits (143), Expect = 2e-09
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Frame = +1
Query: 121 MCILFV-YNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXT 297
MCI+F ++ + + Y LI+A NRDEFY RPS W +N I+ T
Sbjct: 1 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60
Query: 298 WLAVSPLRKKMGVLLN-LPNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNF 474
WL +S R K+ L N L A+ RG++V F+ + ++ SY++++ N F
Sbjct: 61 WLGIS-TRGKLAALTNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGF 119
Query: 475 IFVAMDFGNTT-PVINSFTNVTNSITTHTDP-CLGFGNSLPDMPLKKV 612
+A + VI + N P G N+L + P +K+
Sbjct: 120 NLIAANLSTAKGDVICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKL 167
>AK057461-1|BAB71498.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ32899 fis, clone TESTI2005408, highly similar to
SER/THR-RICH PROTEIN T10 IN DGCR REGION. ).
Length = 273
Score = 59.3 bits (137), Expect = 1e-08
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 3/154 (1%)
Frame = +1
Query: 160 DSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXTWLAVSPLRKKMGVL 339
+ + LI+A NRDEFY RPS W +N I+ TWL +S R K+ L
Sbjct: 20 EGSHRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGTWLGIS-TRGKLAAL 78
Query: 340 LN-LPNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTT-PV 513
N L A+ RG++V F+ + ++ SY++++ N F +A D V
Sbjct: 79 TNYLQPQLDWQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLSTAKGDV 138
Query: 514 INSFTNVTNSITTHTDP-CLGFGNSLPDMPLKKV 612
I + N P G N+L + P +K+
Sbjct: 139 ICYYGNRGEPDPIVLTPGTYGLSNALLETPWRKL 172
>AK092484-1|BAC03902.1| 214|Homo sapiens protein ( Homo sapiens
cDNA FLJ35165 fis, clone PLACE6012028, highly similar to
SER/THR-RICH PROTEIN T10 IN DGCR REGION. ).
Length = 214
Score = 49.6 bits (113), Expect = 1e-05
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +1
Query: 121 MCILFV-YNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXT 297
MCI+F ++ + + Y LI+A NRDEFY RPS W +N I+ T
Sbjct: 1 MCIIFFKFDPRPVSKNAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGKEGGT 60
Query: 298 WLAVSPLRKKMGVLLNLPNTPKKNAKSRGK 387
WL +S R K+ L N P+ + ++RG+
Sbjct: 61 WLGIS-TRGKLAALTNYLQ-PQLDWQARGR 88
>BC044216-1|AAH44216.2| 488|Homo sapiens BAG5 protein protein.
Length = 488
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 484 AMDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTK 630
+MD GN P I+ + + + +GF D KK+E LTK
Sbjct: 41 SMDMGNQHPSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTK 89
>AB020680-1|BAA74896.1| 466|Homo sapiens KIAA0873 protein protein.
Length = 466
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 484 AMDFGNTTPVINSFTNVTNSITTHTDPCLGFGNSLPDMPLKKVEAGLTK 630
+MD GN P I+ + + + +GF D KK+E LTK
Sbjct: 19 SMDMGNQHPSISRLQEIQKEVKSVEQQVIGFSGLSDDKNYKKLERILTK 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,555,132
Number of Sequences: 237096
Number of extensions: 1768323
Number of successful extensions: 3341
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3341
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -