Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11j08
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p pro...    93   3e-19
AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-P...    93   3e-19
AY089289-1|AAL90027.1|  278|Drosophila melanogaster AT08432p pro...    29   7.7  
AF467953-1|AAL76078.1|  426|Drosophila melanogaster histamine-ga...    29   7.7  
AE013599-1591|AAF58451.1|  291|Drosophila melanogaster CG17575-P...    29   7.7  

>AY069312-1|AAL39457.1|  283|Drosophila melanogaster LD02616p
           protein.
          Length = 283

 Score = 93.1 bits (221), Expect = 3e-19
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
 Frame = +1

Query: 121 MCILFVYNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXTW 300
           MC++F    S      Y LI+A+NRDEF+ R +   A W +  ++             TW
Sbjct: 1   MCVIFFCADSNPQPGGYKLILASNRDEFFARATLSAAKWANADHVYGGIDLEPGREGGTW 60

Query: 301 LAV--SPLRKKMGVLLNLPNTPK-KNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNN 471
           LA+  S    K+G LLNL   PK ++A  RG IVA++V   +E  S +   +   ++C  
Sbjct: 61  LAIGHSAGFFKVGALLNLTGEPKPRDAVGRGMIVADYVTRADEEHSILNYNERLLKDCTK 120

Query: 472 ---FIFVAMDFGNTT-PV-INSFTNVTNSITT-HTDPCLGFGNSLPDMPLKKVEAGLTKM 633
              F FV+++ G+ + P  +   +NV  ++       C GFGNSLP  P +KV  G  + 
Sbjct: 121 YSAFNFVSIEIGSASQPARVKLLSNVPPTLEDFQNGECYGFGNSLPHSPFEKVRHGKQEF 180

Query: 634 HDICKGLNKISMKS 675
             I K   + S+++
Sbjct: 181 EAIVKAHGEASVET 194


>AE014298-1933|AAF48295.2|  283|Drosophila melanogaster CG11176-PA
           protein.
          Length = 283

 Score = 93.1 bits (221), Expect = 3e-19
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
 Frame = +1

Query: 121 MCILFVYNGSYDADSDYSLIVATNRDEFYDRPSAELAPWKDNPNIIXXXXXXXXXXXXTW 300
           MC++F    S      Y LI+A+NRDEF+ R +   A W +  ++             TW
Sbjct: 1   MCVIFFCADSNPQPGGYKLILASNRDEFFARATLSAAKWANADHVYGGIDLEPGREGGTW 60

Query: 301 LAV--SPLRKKMGVLLNLPNTPK-KNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNN 471
           LA+  S    K+G LLNL   PK ++A  RG IVA++V   +E  S +   +   ++C  
Sbjct: 61  LAIGHSAGFFKVGALLNLTGEPKPRDAVGRGMIVADYVTRADEEHSILNYNERLLKDCTK 120

Query: 472 ---FIFVAMDFGNTT-PV-INSFTNVTNSITT-HTDPCLGFGNSLPDMPLKKVEAGLTKM 633
              F FV+++ G+ + P  +   +NV  ++       C GFGNSLP  P +KV  G  + 
Sbjct: 121 YSAFNFVSIEIGSASQPARVKLLSNVPPTLEDFQNGECYGFGNSLPHSPFEKVRHGKQEF 180

Query: 634 HDICKGLNKISMKS 675
             I K   + S+++
Sbjct: 181 EAIVKAHGEASVET 194


>AY089289-1|AAL90027.1|  278|Drosophila melanogaster AT08432p
           protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/69 (21%), Positives = 29/69 (42%)
 Frame = +1

Query: 349 PNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTTPVINSFT 528
           P++P         I  E+        + +++M + ++EC+    +A    N +  I  FT
Sbjct: 131 PSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNNSKCIAYFT 190

Query: 529 NVTNSITTH 555
            +    TTH
Sbjct: 191 QLVRDSTTH 199


>AF467953-1|AAL76078.1|  426|Drosophila melanogaster histamine-gated
           chloride channelsubunit protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 456 KIRFHFLNI*CSLIFTFHKFCYNFTSAFCIFLWCIW*IQKYSH 328
           K+ FH ++I    I+ +H     + S   + LWC    + Y H
Sbjct: 149 KVTFHEMSIPNHYIWVYHDKTLFYMSKLTLVLWCALKFESYPH 191


>AE013599-1591|AAF58451.1|  291|Drosophila melanogaster CG17575-PA
           protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/69 (21%), Positives = 29/69 (42%)
 Frame = +1

Query: 349 PNTPKKNAKSRGKIVAEFVKSKNEAASYVQEMKSYFEECNNFIFVAMDFGNTTPVINSFT 528
           P++P         I  E+        + +++M + ++EC+    +A    N +  I  FT
Sbjct: 144 PSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNNSKCIAYFT 203

Query: 529 NVTNSITTH 555
            +    TTH
Sbjct: 204 QLVRDSTTH 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,211,389
Number of Sequences: 53049
Number of extensions: 540128
Number of successful extensions: 1411
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)