Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11j07
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82071-1|CAB04917.1|  209|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AC006712-10|AAK39322.2|  273|Caenorhabditis elegans Hypothetical...    27   8.3  

>Z82071-1|CAB04917.1|  209|Caenorhabditis elegans Hypothetical
           protein W05B5.1 protein.
          Length = 209

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = -3

Query: 396 FSTLGINNPYMYQRNLDDDVRTYLMINLCFFLFSDYSLLLVAITTFQPFDRQPSPAP 226
           F T+ + + Y    N +  V   +   +C+F   D  +  V +T+       PSP P
Sbjct: 7   FDTVELGSAYFLGENFEMAVFQPVFEEVCWFFIPDAPVSRVVVTSDTVIPEAPSPIP 63


>AC006712-10|AAK39322.2|  273|Caenorhabditis elegans Hypothetical
           protein Y119C1B.1 protein.
          Length = 273

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 285 KNSQKTEKSTSLSLNKCGHRRRD 353
           + SQK++KST L   KC  R  D
Sbjct: 137 RKSQKSQKSTKLEKKKCSIRSED 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,063,229
Number of Sequences: 27780
Number of extensions: 192986
Number of successful extensions: 393
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)