Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11j03
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7NTP5 Cluster: Chromosome chr18 scaffold_1, whole geno... 40 0.076
UniRef50_UPI0000E46EEE Cluster: PREDICTED: hypothetical protein,... 37 0.41
UniRef50_UPI0001560B62 Cluster: PREDICTED: similar to FLJ44048 p... 29 0.47
UniRef50_Q22B99 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_A3A0G5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_Q01203 Cluster: M.lini MldsB3 gene ORF1 and ORF2; n=1; ... 33 5.0
UniRef50_P35908 Cluster: Keratin, type II cytoskeletal 2 epiderm... 33 5.0
UniRef50_A6D6M7 Cluster: Transcriptional regulator; n=1; Vibrio ... 33 6.6
UniRef50_P04275 Cluster: von Willebrand factor precursor (vWF) [... 33 6.6
UniRef50_A0BZ28 Cluster: Chromosome undetermined scaffold_138, w... 33 8.8
>UniRef50_A7NTP5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 813
Score = 39.5 bits (88), Expect = 0.076
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +2
Query: 290 ELPLLVPCCEGRELQISEDLVRSGLSAISVKHDSALQCLSMSNCETLQVPPGIVKHRNSF 469
+LP + PC + +DL S+IS H +L+C+S++NC +LQ P + NS
Sbjct: 646 DLPQMFPCLAELTMDHCDDLCELP-SSISRMH--SLECMSITNCHSLQELPADLGKLNSL 702
Query: 470 RSLHRPDLKRVPYLRRMKPDELELLFRGYADL 565
+ L D P L+ + P EL Y D+
Sbjct: 703 QILRIYD---CPSLKTLPPGLCELKCLKYLDI 731
>UniRef50_UPI0000E46EEE Cluster: PREDICTED: hypothetical protein,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 805
Score = 37.1 bits (82), Expect = 0.41
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = +2
Query: 239 ASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAISVKHDSALQCLSMSN 418
AS + ++ + E+ +VP + + I LV S LSAIS+K ++ + S
Sbjct: 234 ASSSSSSSEDEGEEIPEDHSFIVPIYQKNLINIGGHLVESHLSAISMKPETDGKVPSKGK 293
Query: 419 CETLQVPPGIVKHRNSFRSLHRPDLKRVPYLRRMKPDEL--ELLFRGYADLP 568
C RNSFR++ RPD+ RM D L ++ R A LP
Sbjct: 294 CAA----------RNSFRNIFRPDMTYCQGSARMLRDTLVRDIRSRQTASLP 335
>UniRef50_UPI0001560B62 Cluster: PREDICTED: similar to FLJ44048
protein; n=1; Equus caballus|Rep: PREDICTED: similar to
FLJ44048 protein - Equus caballus
Length = 2580
Score = 29.5 bits (63), Expect(2) = 0.47
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 404 LSMSNCETLQVPPGIVKHRNSFRSLHRPDLKRVPYLRRMKPDELELLFRGYA-DLPARSL 580
+S+ L V P RNSF++L +PD+ +V L+ ++ + +L+ R A D+
Sbjct: 2338 ISLDEAGRLNVKPLETASRNSFQNLIKPDITKVELLKDVQ-SKKDLIIRLVAHDIEQEES 2396
Query: 581 QENKE 595
+ N E
Sbjct: 2397 KNNVE 2401
Score = 26.2 bits (55), Expect(2) = 0.47
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 284 KEELPL-LVPCCEGRELQISEDLVRSGLSAISVKHDSALQCLSM 412
+EE P+ ++P + R + I D+V L IS+K S L+ L M
Sbjct: 2257 EEEFPIKIIPHHKKRPINIDPDIVAEHLGVISIKTQS-LEKLQM 2299
>UniRef50_Q22B99 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1496
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 443 GIVKHRNSFRSLHR-PDLKRVPYLRRMKPDELELLFRGYADLPARSLQENKES 598
G++ H+N ++SL + L++ P LR++ D+ +F GY ++L+EN+ S
Sbjct: 58 GVISHKNRYQSLEKVQKLEQSPKLRQINRDQQTTIFDGYT---VKTLEENQTS 107
>UniRef50_A3A0G5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 678
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 185 HPSYWLFHVWSLILLYYCIPVVASWLF 105
HP+ W+ VWSL+L+Y +V WLF
Sbjct: 497 HPALWVTIVWSLLLVYMIYLLVFPWLF 523
>UniRef50_Q01203 Cluster: M.lini MldsB3 gene ORF1 and ORF2; n=1;
Melampsora lini|Rep: M.lini MldsB3 gene ORF1 and ORF2 -
Melampsora lini (Rust fungus)
Length = 614
Score = 33.5 bits (73), Expect = 5.0
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 236 VASGDNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRS 358
V GDN T L A+ L+ LPLL P E L + DLVR+
Sbjct: 437 VEIGDNTTDPLDANTLRAVLPLLSPYAENGILVNTPDLVRN 477
>UniRef50_P35908 Cluster: Keratin, type II cytoskeletal 2 epidermal;
n=31; Coelomata|Rep: Keratin, type II cytoskeletal 2
epidermal - Homo sapiens (Human)
Length = 645
Score = 33.5 bits (73), Expect = 5.0
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 3/165 (1%)
Frame = +2
Query: 164 EIANMKDGSCDLKKKSNNSLQMNPVASGDNVTTGL---SAHRLKEELPLLVPCCEGRELQ 334
E+ NM+D D KKK + + A D VT +A+ +K EL V +E++
Sbjct: 259 ELNNMQDLVEDYKKKYEDEINKRTAAENDFVTLKKDVDNAYMIKVELQSKVDLL-NQEIE 317
Query: 335 ISEDLVRSGLSAISVKHDSALQCLSMSNCETLQVPPGIVKHRNSFRSLHRPDLKRVPYLR 514
+ L + +S I LSM N L + I + + + + + + L
Sbjct: 318 FLKVLYDAEISQIHQSVTDTNVILSMDNSRNLDLDSIIAEVKAQYEEIAQRSKEEAEALY 377
Query: 515 RMKPDELELLFRGYADLPARSLQENKESSQIIFPFAQSVTKAIKQ 649
K +EL++ + D E E +++I + KQ
Sbjct: 378 HSKYEELQVTVGRHGDSLKEIKIEISELNRVIQRLQGEIAHVKKQ 422
>UniRef50_A6D6M7 Cluster: Transcriptional regulator; n=1; Vibrio
shilonii AK1|Rep: Transcriptional regulator - Vibrio
shilonii AK1
Length = 300
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 377 VKHDSALQCLSMSNCETLQVPPGIVKHRNSFRSLHRPDLKRVPYLRRMKPDELE 538
+KHD A+ +++S C + V G+++ ++ +H D+K + R P ELE
Sbjct: 54 LKHDYAIAGIAVSTCGAVNVETGVIEGSSALDYIHGFDVKSLYQERFGLPTELE 107
>UniRef50_P04275 Cluster: von Willebrand factor precursor (vWF)
[Contains: von Willebrand antigen 2 (von Willebrand
antigen II)]; n=415; Amniota|Rep: von Willebrand factor
precursor (vWF) [Contains: von Willebrand antigen 2 (von
Willebrand antigen II)] - Homo sapiens (Human)
Length = 2813
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 248 DNVTTGLSAHRLKEELPLLVPCCEGRELQISEDLVRSGLSAISVKHDSALQCLSMSNCET 427
D V + +HR K L P + + +++L GL + L+C+SM
Sbjct: 750 DAVLSSPLSHRSKRSLSCRPPMV--KLVCPADNLRAEGLECTKTCQNYDLECMSMGCVSG 807
Query: 428 LQVPPGIVKHRNSFRSLHR 484
PPG+V+H N +L R
Sbjct: 808 CLCPPGMVRHENRCVALER 826
>UniRef50_A0BZ28 Cluster: Chromosome undetermined scaffold_138,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_138,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 300
Score = 32.7 bits (71), Expect = 8.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 524 PDELELLFRGYADLPARSLQENKESSQIIFPFAQSVTKAIKQEN 655
PD L LLF+ Y + +Q+NK + I F ++ A+ Q++
Sbjct: 173 PDLLSLLFKNYGAIQEIKVQDNKRKATITFHTTEAANNAVIQQS 216
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,890,424
Number of Sequences: 1657284
Number of extensions: 13186929
Number of successful extensions: 32928
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32916
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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