Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11j02
         (438 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70034-4|CAA93855.1|  103|Caenorhabditis elegans Hypothetical pr...    52   2e-07
Z11505-3|CAA77584.2|  468|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z93385-10|CAB07643.1|  702|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z81114-7|CAB03290.1|  702|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z70034-4|CAA93855.1|  103|Caenorhabditis elegans Hypothetical
           protein C18E9.4 protein.
          Length = 103

 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
 Frame = +2

Query: 98  YTVPHYSQFT-VKGIPQLDELEKALAVKGLKDPWIRNEAWRY---HPGFGTRWQRARKFF 265
           + +P+YS ++  +  PQL + EK LA  GLKDPWIRN  + Y   +P    +W   +K  
Sbjct: 9   FKIPNYSIYSNFRDFPQLAQHEKRLAQIGLKDPWIRNYVYLYDRKYPHVVGQWAHFKKLI 68

Query: 266 FRGFPIGLGLTVITVALDK 322
             G+  G+  T   + +++
Sbjct: 69  LPGWKAGVAFTAALIFVEE 87


>Z11505-3|CAA77584.2|  468|Caenorhabditis elegans Hypothetical
           protein F59B2.5 protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 330 EGVNMGMVTGTRESIDFVVNCLHHCS*NKIELLKK 434
           +GV   +  G +E ID + NC+   + NK E L++
Sbjct: 137 QGVGPALDHGKKEKIDLLTNCIGWATSNKREFLRR 171


>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical protein
            M18.5 protein.
          Length = 1134

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 180  DLKIHGSEMRLGDITLDLALAGREPENSSLEDFPLDWDSQ 299
            DLK+   E+ + D+   ++L        + E+   DW+SQ
Sbjct: 908  DLKVMNEEVAVADVMRSVSLLSYRMLEGNFEEVAKDWNSQ 947


>Z93385-10|CAB07643.1|  702|Caenorhabditis elegans Hypothetical
           protein M01E5.6 protein.
          Length = 702

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 33  NGNLLR*TNNSKQWVVTDM 89
           NG+ L  TN SK+W+V D+
Sbjct: 589 NGSFLFGTNTSKEWIVEDI 607


>Z81114-7|CAB03290.1|  702|Caenorhabditis elegans Hypothetical
           protein M01E5.6 protein.
          Length = 702

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 33  NGNLLR*TNNSKQWVVTDM 89
           NG+ L  TN SK+W+V D+
Sbjct: 589 NGSFLFGTNTSKEWIVEDI 607


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,183,023
Number of Sequences: 27780
Number of extensions: 209991
Number of successful extensions: 606
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)