Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11j02
         (438 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.48 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.48 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   0.84 
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   1.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   4.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   5.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 88  WAPVHSASLLPVYCQ 132
           WAP H+  LL VY Q
Sbjct: 298 WAPFHAQRLLAVYAQ 312


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 122 TGSSEALCTGAHVRDHPLFTIICLP 48
           T SSE+L   AH R +P F+  C P
Sbjct: 57  TRSSESLTAQAHHRLYPAFSSSCDP 81


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 88  WAPVHSASLLPVYCQ 132
           WAP H+  LL VY Q
Sbjct: 283 WAPFHTQRLLYVYAQ 297


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 360 TRESIDFVVNCLHH 401
           T ES+D + N LHH
Sbjct: 459 TEESVDALCNTLHH 472


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 221 HPGFGTRWQRARKFF 265
           HPGF  +  RAR+ F
Sbjct: 199 HPGFADKEYRARRKF 213


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   SSLIIVCEVNGNLLR*TNNSKQWVVTD 86
           S + I+ +++ N+    NN   W+V++
Sbjct: 352 SGIKIIKQISSNIYERQNNEYIWIVSN 378


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 88  WAPVHSASLLPVY 126
           WAP H   LL VY
Sbjct: 273 WAPFHVQRLLYVY 285


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 274 SSKEEFSGSLPASAKSRVISPSLISDPWIFKS 179
           S+ E F G+ P +   +     L   P IFKS
Sbjct: 115 SADEGFDGTYPTNVVVKNNGTCLYVPPGIFKS 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,912
Number of Sequences: 438
Number of extensions: 2895
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)