Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i24
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   5.5  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    23   7.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   7.2  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   9.5  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 73  LLSTATIPVFALECHVVHVIRTRQSP 150
           L+S    PVF ++ H   VIR R+ P
Sbjct: 50  LVSCNRAPVFLIDDHAEIVIRLREFP 75


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 375 KPCPSYCTEPAVCKP 419
           KPC   C +   CKP
Sbjct: 60  KPCTKQCIQGCFCKP 74


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 233  RSNRGRARGTPSSRTHGANPQVVTRCSTGL 144
            RSNRGRAR T   R   A  +V  R ++ +
Sbjct: 1063 RSNRGRARRTRRGRRR-AEERVEVRLASAM 1091


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 357 CRPNRCKPCPSYCTEPAVCKPQ 422
           CR N    C   C EP   KP+
Sbjct: 38  CRKNEEFVCCGPCVEPTCSKPE 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,019
Number of Sequences: 2352
Number of extensions: 11037
Number of successful extensions: 72
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)