Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i22
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92807-2|CAD21652.1|  689|Caenorhabditis elegans Hypothetical pr...    32   0.51 
Z92807-1|CAB07264.1|  747|Caenorhabditis elegans Hypothetical pr...    32   0.51 
AB039949-1|BAC06512.1|  747|Caenorhabditis elegans kinesin protein.    32   0.51 
AB017164-1|BAA32661.1|  689|Caenorhabditis elegans Kinesin like ...    32   0.51 

>Z92807-2|CAD21652.1|  689|Caenorhabditis elegans Hypothetical
           protein K11D9.1b protein.
          Length = 689

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -3

Query: 274 PLQDVATFHTKKYSFAVKYRSFRALLLYTRSMMFDRINENR 152
           P QDV   +   ++FA   R++RA + Y    MFD +NENR
Sbjct: 223 PQQDVQPSNGN-FAFAEMIRNYRAQIDYRPLSMFDGVNENR 262


>Z92807-1|CAB07264.1|  747|Caenorhabditis elegans Hypothetical
           protein K11D9.1a protein.
          Length = 747

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -3

Query: 274 PLQDVATFHTKKYSFAVKYRSFRALLLYTRSMMFDRINENR 152
           P QDV   +   ++FA   R++RA + Y    MFD +NENR
Sbjct: 281 PQQDVQPSNGN-FAFAEMIRNYRAQIDYRPLSMFDGVNENR 320


>AB039949-1|BAC06512.1|  747|Caenorhabditis elegans kinesin protein.
          Length = 747

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -3

Query: 274 PLQDVATFHTKKYSFAVKYRSFRALLLYTRSMMFDRINENR 152
           P QDV   +   ++FA   R++RA + Y    MFD +NENR
Sbjct: 281 PQQDVQPSNGN-FAFAEMIRNYRAQIDYRPLSMFDGVNENR 320


>AB017164-1|BAA32661.1|  689|Caenorhabditis elegans Kinesin like
           protein (klp-7) protein.
          Length = 689

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -3

Query: 274 PLQDVATFHTKKYSFAVKYRSFRALLLYTRSMMFDRINENR 152
           P QDV   +   ++FA   R++RA + Y    MFD +NENR
Sbjct: 223 PQQDVQPSNGN-FAFAEMIRNYRAQIDYRPLSMFDGVNENR 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,186,742
Number of Sequences: 27780
Number of extensions: 329155
Number of successful extensions: 521
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)