Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11i20
(717 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomy... 28 1.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.7
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 3.5
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 26 4.7
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 26 6.2
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 25 8.2
SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr ... 25 8.2
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 8.2
SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.2
>SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 573 LSEECITKTSETIKLLSKDKI-ILCTGTIMKDIVK 674
+ E+C+TK+ T+ L K+K+ + T ++K +V+
Sbjct: 231 VDEDCVTKSLHTLYLFQKNKVSVANTNELLKSLVQ 265
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 2.7
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = -3
Query: 484 SGP*TS-NRLSYSSRVTVPLSPICLFKGTKSVGHEISATLPLSSNTLSITLTRECTVFSS 308
S P TS N + +S + PLS + T + +++ PLSS + + T +S
Sbjct: 305 STPLTSVNSTTTTSASSTPLSSVSSANSTTATS---TSSTPLSSVNSTTATSASSTPLTS 361
Query: 307 YQN*LSCQFSSNKIFSVNFLSASS 236
+ + SS + SVN SA+S
Sbjct: 362 VNSTTATSASSTPLTSVNSTSATS 385
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/52 (23%), Positives = 33/52 (63%)
Frame = -3
Query: 379 SATLPLSSNTLSITLTRECTVFSSYQN*LSCQFSSNKIFSVNFLSASSFTRI 224
SAT ++ +++S +++ + ++ SSY + +S ++ ++ +++SS+T I
Sbjct: 785 SATPTITQSSISTSVSSQSSMNSSYSSPISSNSVTSSTSIISSIASSSYTSI 836
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 210 SKRQEILVKLEADKKLTE-NILFDENWQLSQFWYDEKTVHSLVKVIDKVLDDRG 368
S+R+E+ +K KL + NI+FD N S E +L+++ID V ++RG
Sbjct: 217 SEREELFIK-----KLEQCNIIFDFNDPSSDLASKEIKREALLQMIDYVSENRG 265
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.8 bits (54), Expect = 6.2
Identities = 8/28 (28%), Positives = 20/28 (71%)
Frame = +3
Query: 288 QLSQFWYDEKTVHSLVKVIDKVLDDRGK 371
++++ YD+ + ++ +ID+ L+D+GK
Sbjct: 44 EIAELTYDQNEMLEVMDIIDRRLNDKGK 71
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +3
Query: 414 RQIGDRGTVTLLEYDRRFEVHGPDYIFYDYNNPKEVPPDVHHSYDLVVADP 566
R +G +Y R F+ PD + YN+P + V+ V+ +P
Sbjct: 181 RSLGSLSITANPKYKRGFQPLLPDVVQAVYNDPASIEQFVNDKTAAVIVEP 231
>SPBC9B6.03 |||zinc finger protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 293
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 218 SFTLFSIEF-L*SSKCLC*QCGHVFICFHCTKRCSFSLTLLF 96
SF S+ F L + C +CG +F HC + ++ + F
Sbjct: 161 SFPSCSVRFGLFDRRHHCRRCGDIFCALHCDRNIPLTMDVKF 202
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 25.4 bits (53), Expect = 8.2
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 10/111 (9%)
Frame = +3
Query: 198 YAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDEKTVHSLVKVIDKVLDDRGKVA 377
+ E E+ + + K T +L D N Q++Y+ + + KVLD +
Sbjct: 224 FLETRAEYELYLSKMEEAKSTIYLLLDRNPDNHQYYYNLQRAYGYEDASGKVLDSAEWLN 283
Query: 378 LIS----------CPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDYIFYD 500
L S CPT +PL++ GD + Y R+ G +F D
Sbjct: 284 LYSQLAKRYPKSECPTR-LPLEKLEGDEFLTHVDLYLRKKLKRGIPSVFVD 333
>SPACUNK4.11c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 25.4 bits (53), Expect = 8.2
Identities = 8/19 (42%), Positives = 17/19 (89%)
Frame = +3
Query: 240 EADKKLTENILFDENWQLS 296
+A+++L++NI+ DE+W L+
Sbjct: 21 QAEEELSKNIVTDEHWSLA 39
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,805,613
Number of Sequences: 5004
Number of extensions: 56800
Number of successful extensions: 176
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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