Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i20
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73428-4|CAH60777.1|  218|Caenorhabditis elegans Hypothetical pr...   138   3e-33
Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical pr...    36   0.022
AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical...    31   0.62 
U97193-4|AAB52439.1|  691|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U61949-9|AAB03156.3|  433|Caenorhabditis elegans Hypothetical pr...    29   4.4  
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p...    28   7.7  

>Z73428-4|CAH60777.1|  218|Caenorhabditis elegans Hypothetical
           protein M142.8 protein.
          Length = 218

 Score =  138 bits (335), Expect = 3e-33
 Identities = 78/205 (38%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
 Frame = +3

Query: 135 MEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDE 314
           M   +D+P LSA+T AAL  F AEQ   QE + +L++   + E I  DE+WQLSQFWYD+
Sbjct: 1   MSDTDDIPQLSADTLAALSMFQAEQ---QEKIEQLQSG--IIEKI--DEDWQLSQFWYDD 53

Query: 315 KTVHSLV-KVIDKVLDDR----GKVALISCPTL---FVPLKRQIGDRGTVTLLEYDRRFE 470
           +T   LV + +   L+       ++  +S PTL   F   +     +  +TL E+D RF 
Sbjct: 54  ETSRKLVAEGVAAALEGSEARPARIGCVSSPTLVKFFHETEEYKTGQIQLTLFEFDDRFG 113

Query: 471 VHGP-DYIFYDYNNPKEVPPDVHHSYDLVVADPPFLSEECITKTSETIKLLSKD--KIIL 641
           +  P +++ YDY +P ++P ++   +D+++ADPPFL+ EC+ KT+ +I+LL K   K++L
Sbjct: 114 LKFPTEFVHYDYKHPTDLPAELLAKFDVIIADPPFLAAECLIKTAHSIRLLGKSDVKVLL 173

Query: 642 CTGTIMKDIVKELLDLKLCEFQPKH 716
           CTG IM+D    L+ +    F+P+H
Sbjct: 174 CTGAIMEDYASRLMAMHRTSFEPRH 198


>Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical
           protein F33A8.4 protein.
          Length = 467

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
 Frame = +3

Query: 294 SQFWYDEKTVHSLVKVIDKVLDDRGKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEV 473
           SQF++  +T+  + K ++K   D   +  I  P +F  + R +     V LL+YD+RF  
Sbjct: 212 SQFFFSTETLDVITKAVEKSKVDG--ILCIGAPRIFENI-RALHPEKNVFLLDYDKRFAK 268

Query: 474 HGP--DYIFY----DYNNPKEVPPDVHHSYD-----LVVADPPF-LSEECITKTSETIK 614
             P   Y  Y    D+   K   P +   +D     L++ DPPF +  E + K+ E +K
Sbjct: 269 FFPSKQYAQYSMLVDHFFDKIAEPKLMEFFDKSKSILMITDPPFGVFMEPLLKSIEKMK 327


>AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical
           protein Y47D3A.28 protein.
          Length = 691

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 570 FLSEECITKTSETIKLLSKDKIILCTGTIMKDIVKELLDLKLC 698
           F S ECI K  + IK  +  +   CTG   + +  E++ +K C
Sbjct: 611 FASSECIKKEHKLIKHTADKRFFKCTGCKKRTVCFEMMPVKHC 653


>U97193-4|AAB52439.1|  691|Caenorhabditis elegans Hypothetical
           protein C06A5.6 protein.
          Length = 691

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
 Frame = +3

Query: 276 DENWQLSQFWYDEKTVHSLVKVIDKVLDDRGKVALISCP-------TLFVPLKRQIGDRG 434
           D N Q+++F+ D+    S V  +    DDRG   +  CP       T+ + +K  IG R 
Sbjct: 229 DLNGQINEFYKDKVKRKSGVHALIYKKDDRGDKLIFDCPSILGTSMTMALEIKDVIGHRS 288

Query: 435 TV----TLLEYDRRFEVHGPDYIFYDYNN 509
                 T L YD       P     D+N+
Sbjct: 289 VAENDPTALSYDELVSKQLPTVDIDDHNS 317


>Z50742-5|CAA90618.2|  650|Caenorhabditis elegans Hypothetical
           protein K09A11.5 protein.
          Length = 650

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = -3

Query: 454 YSSRVTVPLSPICLFKGTKSVGHEISATLPLSS-NTLSITLTRECTVFSSYQN*LSCQFS 278
           Y+S   +  SPI L +    +G + ++ +PL +    S   +  C +  +YQN   C + 
Sbjct: 535 YASIEVIGRSPIALTRERTFIGTDQNSNIPLQNFGVCSNWASTHCMI--AYQNPSFCLY- 591

Query: 277 SNKIFSVNFLSASSFT 230
           +N + +VN +    FT
Sbjct: 592 ANHVVAVNRIRYKEFT 607


>U61949-9|AAB03156.3|  433|Caenorhabditis elegans Hypothetical
           protein F49E8.1 protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 705 GIRIILNLAIPL-LYPSLWYRCIKLFYLSKAI*LSPMFL 592
           GI  +  +AI L L PSL  RC++  +  + + L PMFL
Sbjct: 244 GINTVREIAIILELDPSLVARCVRNLHFYECVSLVPMFL 282


>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
            protein R05D3.1 protein.
          Length = 1053

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +3

Query: 207  QSKRQEILVKLEADKKLTEN-ILFDENWQLSQFWYDEKTVHSLVKVIDKVLDDRGKVALI 383
            Q    ++L   +    LTEN +LFD N +L +F    +      +V   + + R K+   
Sbjct: 875  QKSNSDLLNYFKLRTSLTENRVLFDRNGELKEFGNISEIAAEFFEVRRDLYEKRLKIQKE 934

Query: 384  SCPTLFVPLKRQI 422
             C    + ++ Q+
Sbjct: 935  ECEAKLIYVENQL 947


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,417,278
Number of Sequences: 27780
Number of extensions: 318687
Number of successful extensions: 925
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)