Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i20
         (717 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g58470.1 68416.m06517 expressed protein several hypothetical ...   140   6e-34
At5g61720.1 68418.m07744 expressed protein predicted protein, Ar...    30   1.8  
At3g07160.1 68416.m00853 glycosyl transferase family 48 protein ...    29   2.3  
At1g32930.1 68414.m04056 galactosyltransferase family protein co...    28   5.4  
At5g66270.1 68418.m08356 zinc finger (CCCH-type) family protein ...    28   7.1  
At1g61850.1 68414.m06979 patatin family protein similar to membr...    28   7.1  

>At3g58470.1 68416.m06517 expressed protein several hypothetical
           proteins - Saccharomyces cerevisiae
          Length = 248

 Score =  140 bits (340), Expect = 6e-34
 Identities = 76/200 (38%), Positives = 121/200 (60%), Gaps = 9/200 (4%)
 Frame = +3

Query: 144 DEDVPTLSAETFAALQEFYAEQSKRQEILVKLE--ADKKLTENI-LFDENWQLSQFWYDE 314
           D+D   LS++  AAL+EF A+Q+K           A  + ++ + L  E+W+LSQFWY+ 
Sbjct: 24  DDDPLVLSSQALAALREFLADQNKTVASTPPASSVAGGEESDKVELVTEDWRLSQFWYEP 83

Query: 315 KTVHSLVKVIDKVLDDR---GKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPD 485
           +T  ++   +   L  R    +VA I+CPTL+V LK++      V LLEYD RFE +G +
Sbjct: 84  ETAETVADEV-VTLSQRIPGCRVACIACPTLYVYLKKRDPSL-QVQLLEYDMRFERYGKE 141

Query: 486 YIFYDYNNPKEVPPDVHHSYDLVVADPPFLSEECITKTSETIKLLSK---DKIILCTGTI 656
           + FYDYN P+++P  + H + ++VADPP+LS EC+ + S+TI  L+      ++L TG +
Sbjct: 142 FTFYDYNEPEDLPLQLKHCFHIIVADPPYLSRECLERVSQTILFLASPVDSLLLLLTGEV 201

Query: 657 MKDIVKELLDLKLCEFQPKH 716
            ++   ELL ++ C F+P H
Sbjct: 202 QREHAAELLGVRPCVFKPHH 221


>At5g61720.1 68418.m07744 expressed protein predicted protein,
           Arabidopsis thaliana
          Length = 390

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 366 GKVALISCPTLFVPLKRQIGDRGTVTLLEYDRRFEVHGPDY 488
           GK++L  C TL V L      +GT +L  Y + F   G DY
Sbjct: 2   GKISLAICLTLLVTLSTVYETQGTFSLPLYLKNFPKLGKDY 42


>At3g07160.1 68416.m00853 glycosyl transferase family 48 protein
           similar to glucan synthase GB:AAD11794 [Filobasidiella
           neoformans var. neoformans]
          Length = 1931

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +3

Query: 141 ADEDVPTLS-AETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENWQLSQFWYDEK 317
           A  +V T+  ++    LQEFY    ++  +    E +K+L E+  F +  +L +     K
Sbjct: 103 AKREVGTIDRSQDILRLQEFYRLYREKNNVDTLKEEEKQLRESGAFTD--ELERKTVKRK 160

Query: 318 TVHSLVKVIDKVLDDRGK 371
            V + +KV+  VL+   K
Sbjct: 161 RVFATLKVLGSVLEQLAK 178


>At1g32930.1 68414.m04056 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 399

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 158 HIVSRDICCFTGILC*TK*KTRNPCKA 238
           HI  R +CC T + C  K +  NPC A
Sbjct: 338 HIDDRSLCCGTPLDCEWKGQAGNPCAA 364


>At5g66270.1 68418.m08356 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 449

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 156 PTLSAETFAALQEFYAEQSKR--QEILVKLEADKKLTENIL 272
           P LS    AAL     EQ  +   ++LVKL +D K+ EN++
Sbjct: 157 PELSLLASAALSALTKEQGSQVDPDLLVKLLSDPKIVENLI 197


>At1g61850.1 68414.m06979 patatin family protein similar to
           membrane-associated calcium-independent phospholipase A2
           gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
           Patatin domain PF01734, PF00514:
           Armadillo/beta-catenin-like repeat
          Length = 1265

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = +3

Query: 129 CAMEADEDVPTLSAETFAALQEFYAEQSKRQEILVKLEADKKLTENILFDENW 287
           C ME DE  P +  +  AA++EF   QS  Q   V     ++LT   L DE W
Sbjct: 779 CGMELDETDPAIWLKLEAAIEEFI--QSNPQ---VFKNVCERLTLPFLNDEKW 826


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,231,060
Number of Sequences: 28952
Number of extensions: 284395
Number of successful extensions: 836
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)