Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i19
         (516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DA2AD6 Cluster: PREDICTED: hypothetical protein;...    34   2.2  
UniRef50_UPI0000DB70B5 Cluster: PREDICTED: similar to CG14650-PA...    33   2.9  

>UniRef50_UPI0000DA2AD6 Cluster: PREDICTED: hypothetical protein;
           n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 1656

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 25/92 (27%), Positives = 43/92 (46%)
 Frame = +1

Query: 130 RSKIFSKRHLSSTLFNLFTERI*ILSKWIRRRMFMFVSTVYIQCTFSTCIVHARTGNRSR 309
           RS+   +    S  + + T R  I S W R + F  +  +++     +C V  R   R  
Sbjct: 463 RSRNGXQXSXQSLKWRINTXRPVISSXWSRWQPFRMLLRIFVXHLQRSCXVFQRGPQRGI 522

Query: 310 LKIQPSLPAPRRVVQTRAVTTLPKFKRILGLQ 405
           L +Q  +P+    + +R V  +PKF+R L L+
Sbjct: 523 LSLQGPVPS----LWSRTVIPIPKFRRWLCLR 550


>UniRef50_UPI0000DB70B5 Cluster: PREDICTED: similar to CG14650-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG14650-PA - Apis mellifera
          Length = 827

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +1

Query: 73  PVQRIFLNFHRQNLHWKHLRSKIFS-KRHLSSTLFNLFTERI*ILSK--WIRRRMFMFVS 243
           PV+ ++ N ++   HW  +  KIF    HL S + ++    + +L+K  W    +++  S
Sbjct: 446 PVKDLYKNLNKYASHWIKIGLKIFHWLLHLVSDVVSMSANLMILLAKCGWYHTILYLKYS 505

Query: 244 TVYIQCTFS 270
            VY+  TFS
Sbjct: 506 WVYMAITFS 514


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,366,505
Number of Sequences: 1657284
Number of extensions: 9973853
Number of successful extensions: 20603
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20596
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)