Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11i17
(707 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16ZQ8 Cluster: Putative uncharacterized protein; n=2; ... 90 6e-17
UniRef50_Q86CW0 Cluster: CG2124; n=4; Sophophora|Rep: CG2124 - D... 61 3e-08
UniRef50_A3XKT7 Cluster: DNA mismatch repair protein; n=1; Leeuw... 40 0.079
UniRef50_UPI00006CA6F2 Cluster: hypothetical protein TTHERM_0068... 38 0.24
UniRef50_UPI00006CC42E Cluster: hypothetical protein TTHERM_0013... 36 1.3
UniRef50_A0DZB0 Cluster: Chromosome undetermined scaffold_7, who... 35 1.7
UniRef50_UPI00006CC403 Cluster: hypothetical protein TTHERM_0013... 35 2.3
UniRef50_A2EBG3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q23EC2 Cluster: Cyclin, N-terminal domain containing pr... 34 3.0
UniRef50_A0DMU3 Cluster: Chromosome undetermined scaffold_57, wh... 34 3.0
UniRef50_Q22P52 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q9PQ50 Cluster: Unique hypothetical membrane lipoprotei... 33 5.2
UniRef50_Q9XTM8 Cluster: RADHA protein; n=2; Drosophila melanoga... 33 5.2
UniRef50_Q8I5W5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A2DJI6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A0BM14 Cluster: Chromosome undetermined scaffold_115, w... 33 6.9
UniRef50_Q6CDJ8 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 6.9
UniRef50_Q01055 Cluster: Capsid assembly protein 63; n=3; Herpes... 33 6.9
UniRef50_A5AUA1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
UniRef50_Q7RRG5 Cluster: Triosephosphate isomerase, putative; n=... 33 9.1
UniRef50_A7RNH0 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.1
>UniRef50_Q16ZQ8 Cluster: Putative uncharacterized protein; n=2;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 649
Score = 89.8 bits (213), Expect = 6e-17
Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Frame = +2
Query: 191 RLQCVSQFKLKPGYTRSIHSSTGLFIKMYMEKENEYAYSVLENKGYAINIYTKHSSEAIS 370
R +C S ++ P +R +H+S + K + + EN+YA+ +L+ + + + + +
Sbjct: 21 RFKC-SGSQVSP-VSRFLHTSGSVGAKKFSDTENDYAHGILQRQ--QVPVGATIAIQRFE 76
Query: 371 QEEFQRLNKEDWTKKTTQEIFEIFPIFGKYCSQHSLCISSEIFDNFIDNLTDTIQMATDS 550
++ DW +T+E+ + F + C Q +CIS FD F++ + ++ TD
Sbjct: 77 GKQLDLAEVSDWKTCSTREVLDWFHRVVELCKQDGMCISDGSFDGFVEAMVGRMEELTDE 136
Query: 551 QL-KTLFYSLNMWPETASIRTRNYIEVWAALDDECLKRLKNWSHDEML 691
++ +TL + PETA++ RNY+E+W A D CL R+ W +++L
Sbjct: 137 EIVETLHLLAEIGPETAAVDMRNYMELWNAADRVCLGRVSRWDTEKLL 184
>UniRef50_Q86CW0 Cluster: CG2124; n=4; Sophophora|Rep: CG2124 -
Drosophila melanogaster (Fruit fly)
Length = 629
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Frame = +2
Query: 269 KMYMEKENEYAYSVLEN--KGYAINIYTKHSS--EAISQEEFQRLNKEDWTKKTTQEIFE 436
+++ ++EN++A+ +L + K YAI + + S+ + + E F R + + +++
Sbjct: 28 RIFADRENQFAHGILMDSLKPYAI-LRPRDSAWQDLPASEGFMRPQPD----ASAADLYA 82
Query: 437 IFPIFGKYCSQHSLCISSEIFDNFIDNLTDTIQMATDSQLKTLFYSLNMWPETASIRTRN 616
F ++C++ L IS ++ F + + TD QL +L P S + +N
Sbjct: 83 DFLGLVRHCNRMELKISDSRYEAFTRCFCEQLHRLTDEQLLGSLSALAELPVPESPKAKN 142
Query: 617 YIEVWAALDDECLKRLKNWSHDEML 691
Y+E+W LD EC +R++ WS +++L
Sbjct: 143 YMEIWNTLDIECCRRIERWSSEQLL 167
>UniRef50_A3XKT7 Cluster: DNA mismatch repair protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: DNA mismatch
repair protein - Leeuwenhoekiella blandensis MED217
Length = 198
Score = 39.5 bits (88), Expect = 0.079
Identities = 27/74 (36%), Positives = 38/74 (51%)
Frame = +2
Query: 215 KLKPGYTRSIHSSTGLFIKMYMEKENEYAYSVLENKGYAINIYTKHSSEAISQEEFQRLN 394
K+KPG T SIH I + +E E A S NKGYA N+ + + + FQ+ +
Sbjct: 104 KVKPGDTLSIHFKDDSEISLTLEASAEQATS---NKGYACNVRALIDKKQL--QFFQKKS 158
Query: 395 KEDWTKKTTQEIFE 436
D+ KT +E FE
Sbjct: 159 IRDYKIKTAKEHFE 172
>UniRef50_UPI00006CA6F2 Cluster: hypothetical protein TTHERM_00683320;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00683320 - Tetrahymena thermophila SB210
Length = 3801
Score = 37.9 bits (84), Expect = 0.24
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Frame = +2
Query: 194 LQCVSQFKLKPGYTRSIHSS--TGLFIKMYMEKENEYAYSVLENKGYAINIYTKHSSEAI 367
L C F+LK ++ + + S LF K + K +E + + +N+ K+ ++ I
Sbjct: 2649 LACGFNFELKDVFSCNPYDSIYNQLFRKQNIHKLDEQEQYKALKEFFKVNVL-KNLNQVI 2707
Query: 368 SQEEFQRLNKEDWTKKTTQEIFEIF--PIFGKYCSQHSLCISSEIFDNFIDNLTDTI--Q 535
S E + L + + F IF ++ + SQH IS IFD +I+N D I Q
Sbjct: 2708 SIRESKDL---EIVQNEGDFYFRIFYNSVYKRIASQHDGQISQSIFDMYINNFDDLIRPQ 2764
Query: 536 MATDSQLKTL 565
++ QLK++
Sbjct: 2765 YPSEKQLKSI 2774
>UniRef50_UPI00006CC42E Cluster: hypothetical protein
TTHERM_00136030; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00136030 - Tetrahymena
thermophila SB210
Length = 2532
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 455 KYCSQHSLCISSEIFDNFIDNLTDTIQMATDSQLKTLFYSLNMWPETASIRTRNYIEVWA 634
K C + C +S++ D +DNL D + D QL+ YS+ + E+ S +++ Y++ W
Sbjct: 550 KRCYEREACYASKVADG-LDNLKDIEDVVIDKQLEDHSYSI--FQESLSKKSKLYLKKWL 606
Query: 635 AL 640
L
Sbjct: 607 DL 608
>UniRef50_A0DZB0 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 419
Score = 35.1 bits (77), Expect = 1.7
Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Frame = +2
Query: 287 ENEYAYSVLENKGYAINIYTKHSSEAISQEEFQRLNKEDWTKKTTQEIFEIFPIFGKYCS 466
+ +Y ++ L+ + + EAI + +F++ +++W + E
Sbjct: 259 DKQYQFTQLDKLKQNLIKFKNQYVEAIEKLQFKQQKQQNWNLGFFKSKIETTQKIPNQIF 318
Query: 467 QHSLCISSEIFDNFIDNLTDT---IQMATDSQLKTLFYSLNMWPETASIRTRN-YIEVWA 634
L + D F+ N TD I ++ L L+ + ++ N Y+ ++
Sbjct: 319 DQ-LQTDWKTLDTFLKNNTDKNEQIYQLIFDHIRLLDVCLDYKEVQHNFQSLNFYVTIYT 377
Query: 635 ALDDECLKRLKNWSHDEMLSFI 700
+D + +K LKNW +D ++ +I
Sbjct: 378 QIDQQLIKLLKNWKNDLLIDYI 399
>UniRef50_UPI00006CC403 Cluster: hypothetical protein
TTHERM_00133620; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00133620 - Tetrahymena
thermophila SB210
Length = 367
Score = 34.7 bits (76), Expect = 2.3
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +2
Query: 266 IKMYMEKENEYAYSVLENKGYAINIYTKHSSEAISQEEFQRLNKEDWTKKTTQEIFEI-- 439
++ Y +K +Y ++ EN + I + + + I E Q+ D KK++ ++
Sbjct: 254 LEEYQKKNKQYLKNIKENNSF-IKQLEETNKDLIKTIEKQQQETND--KKSSNNCIKLLN 310
Query: 440 FPIFGKYCSQHSLCISSEIFDNFIDNLTDTIQ 535
FP+ GK +H + S I NF++NL + Q
Sbjct: 311 FPLNGKISQKHFDELFSTIQRNFVENLDNEYQ 342
>UniRef50_A2EBG3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 864
Score = 34.7 bits (76), Expect = 2.3
Identities = 29/100 (29%), Positives = 50/100 (50%)
Frame = +2
Query: 227 GYTRSIHSSTGLFIKMYMEKENEYAYSVLENKGYAINIYTKHSSEAISQEEFQRLNKEDW 406
G R++ S T LF +M + N+ VL N+ + +T + A + EF + D+
Sbjct: 631 GVCRAVGSLTQLFKQM--QATNKMKNYVLLNQDWQNQAFTNILTVATNLFEF--VKSFDY 686
Query: 407 TKKTTQEIFEIFPIFGKYCSQHSLCISSEIFDNFIDNLTD 526
++I + F F +Q S+ IS+E+F FID L++
Sbjct: 687 HYSNIEDIEQCFDSFFWGVTQQSMLISNELFLAFIDFLSN 726
>UniRef50_Q23EC2 Cluster: Cyclin, N-terminal domain containing
protein; n=3; Eukaryota|Rep: Cyclin, N-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 2106
Score = 34.3 bits (75), Expect = 3.0
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 281 EKENEYAYSVLENKGYAINIYTKHSSEAISQEEFQRLNKEDWT 409
+ N Y Y +K Y+ NIY ++++ISQ EFQ++ +E T
Sbjct: 642 DNNNYYGYQENSHKQYS-NIYNFPTNQSISQNEFQKIQQEKMT 683
>UniRef50_A0DMU3 Cluster: Chromosome undetermined scaffold_57, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_57,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1257
Score = 34.3 bits (75), Expect = 3.0
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 467 QHSLCISSEIFDNFIDNLTDTIQMATDSQLKTLFYSLNMWPETASIRTRNYIEVWAALDD 646
++++C +EI +DNL T+ Q F S+ ++ + A + N + + L
Sbjct: 134 EYNICYGNEIDTRELDNLIQTLSRLITCQSVQEFNSIAIYQKEADQKQNNSVLITFKLTK 193
Query: 647 ECLKRLKNWS 676
EC LK +S
Sbjct: 194 ECFMNLKFYS 203
>UniRef50_Q22P52 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1160
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 266 IKMYMEKENEYAYSVLENKGYAINI--YTKHSSEAISQEEFQRLNKEDWTKKTTQEIFEI 439
I + + Y L++KG+++ I +T+ + + Q F N+ED+ K +IF +
Sbjct: 211 ITLNKDYNQNYIVLDLQSKGFSLRIDGFTQSVFQQLFQTIFYFENQEDYFKIQASKIFPL 270
Query: 440 FPIFGKYCSQHSL 478
P F K + H L
Sbjct: 271 LPFFIKNLNIHDL 283
>UniRef50_Q9PQ50 Cluster: Unique hypothetical membrane lipoprotein;
n=1; Ureaplasma parvum|Rep: Unique hypothetical membrane
lipoprotein - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 499
Score = 33.5 bits (73), Expect = 5.2
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 1 DFDITNKPDFNVGIK*NTEVNNNGEITCTNTRLKGSLDFVN*RIFKYEYFYK-YW 162
+++ITNK DFN+ ++ NN E + T LK + +N ++ K+ F YW
Sbjct: 308 NYEITNKLDFNIFLE--KSFLNNKEYSSTKNELKRFFENINDQLNKFNLFVNAYW 360
>UniRef50_Q9XTM8 Cluster: RADHA protein; n=2; Drosophila
melanogaster|Rep: RADHA protein - Drosophila
melanogaster (Fruit fly)
Length = 1332
Score = 33.5 bits (73), Expect = 5.2
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Frame = +2
Query: 314 ENKGYAINIYTKHSSEAISQEE--FQRLNKEDWTKKTTQEIFEIFPIFGKYCSQHSLCIS 487
E+ YA++ S+E + ++ + + + + +F I K S+ L IS
Sbjct: 613 EDLSYALSEEHSSSNEKLDKKPGASKTMRPPEHVDTDLETDISVFSIQKKRKSKSKLVIS 672
Query: 488 SEIFDNFIDNLTDTIQMATDSQLKTLFYSLNMWPETASIRTRNYIEVWAALDDECLKRLK 667
+E+ NF D+ TDT++ + K W E ++T+ IE L C L
Sbjct: 673 NELH-NFEDSSTDTLEKGRPNPSKGDLKLRARWVEVNKVQTQALIETEKFLQKTCPAELD 731
Query: 668 NWSHDEMLS 694
+++ ++
Sbjct: 732 EVLYEDQVA 740
>UniRef50_Q8I5W5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 3525
Score = 33.1 bits (72), Expect = 6.9
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 360 KLYLKKSFSD*IKKIGLRKQPKKFLKYSLYSENIVHN 470
K LKK D IKK+G RK+ KK ++YS Y+++ +++
Sbjct: 148 KKSLKKLKHDEIKKVGERKKEKKKVRYSSYNKSYLND 184
>UniRef50_A2DJI6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2481
Score = 33.1 bits (72), Expect = 6.9
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Frame = +2
Query: 236 RSIHSSTGLFIKMYMEKE----NEYAYSVLENKGYAINIYTKHSSEAISQEEFQRLNKED 403
+ I + + I M ++ E E S+++ ++ +Y H E I +E +N+
Sbjct: 1356 KEIRNIIAILIAMDIDDEIKIYGEELMSIVDQFDISLKLYFFHHLELIKRE----MNQIQ 1411
Query: 404 WTKKTTQEIFEIFPIFGKYCSQHSLCIS------SEIFDNFIDNLTDTIQMATDSQLKTL 565
+ + ++I+E F +Y +++S+ I SE+ FI+ D +A + Q L
Sbjct: 1412 ESNEKAKQIWEKMKSFDEYLTENSIYIQQRWIYLSELCQKFIEIENDLTDLANELQNPKL 1471
Query: 566 FYSLNMWPETASIRTRNYIEVWAALDDE 649
SLN E I + + + DDE
Sbjct: 1472 IKSLNAVMEINYI-LKYWTNAFDLTDDE 1498
>UniRef50_A0BM14 Cluster: Chromosome undetermined scaffold_115,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_115,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 799
Score = 33.1 bits (72), Expect = 6.9
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +2
Query: 191 RLQCVSQFKLKPGYTRSIHSSTGLFIKMYMEKENEYAYSVLENKGYAINIYT--KHSSEA 364
R+ C+ + P S+ + + K K+N+Y + +NK I K SEA
Sbjct: 225 RMACIQCIEEIPNSYTSLKTVQDKWKKFEEFKKNKYQQILEQNKENKDQILEQLKIISEA 284
Query: 365 ISQEEFQRLNK-EDWTKKTTQEIFEIFPIFGKYCSQHSLCISSEIFDNFIDNLTDT 529
++ Q D+ + QE+ +IF GK ++C EIFDN +T T
Sbjct: 285 HNEMNLQITQYLNDYCQSLNQEMQQIFSQMGK---NWAICQQKEIFDNIEKLITPT 337
>UniRef50_Q6CDJ8 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 176
Score = 33.1 bits (72), Expect = 6.9
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 185 IFRLQCVSQFKLKPGYTRSIHSSTGLFIKMYMEKENEYAYSVLENKGYAINI--YTKHSS 358
+ R+ VS +K +R IH S+ FIKM +K + EN+ + ++ HSS
Sbjct: 1 MLRIARVSHNAVKMASSRGIHFSSDGFIKMKDQKHILKVMNSPENQWSTDELLSHSDHSS 60
Query: 359 EAISQEEFQRLNKE 400
+ I+ E Q+++K+
Sbjct: 61 DEITSETLQKVSKK 74
>UniRef50_Q01055 Cluster: Capsid assembly protein 63; n=3;
Herpesviridae|Rep: Capsid assembly protein 63 -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 899
Score = 33.1 bits (72), Expect = 6.9
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 6/185 (3%)
Frame = +2
Query: 167 KLLITSIFR---LQCVSQFKLKPGYTRSIHSSTGLFIKMYMEKENEYAYSVLENKGYAIN 337
K L+T F+ L + LK T I LF+ + +EY+ ++ K A+N
Sbjct: 181 KWLLTQHFKFLNLDYTAFNSLKDQATYLITHEKHLFVPL---SSSEYSLTLPLAKNQALN 237
Query: 338 IYTKHSSEAISQEEFQRL--NKEDWTKKTTQEIFEIFPIFGKYCSQHSLCISSEIFDNFI 511
IYT ++ I++ L + ++ T T + F I +HS + I + FI
Sbjct: 238 IYTSFTTNTITKSNVPVLAFSAKELTDATPELFFLYDFIIEALYHEHSYNVPQNIIEQFI 297
Query: 512 DNLTDTI-QMATDSQLKTLFYSLNMWPETASIRTRNYIEVWAALDDECLKRLKNWSHDEM 688
T + + Q+K SL ++ IR + L +EC RL+
Sbjct: 298 SKNTQFMTDLCNTIQIKCSNKSLT----SSEIRHIKELLESCGLTEECCHRLQTSVLISN 353
Query: 689 LSFIS 703
+SF S
Sbjct: 354 VSFTS 358
>UniRef50_A5AUA1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 707
Score = 32.7 bits (71), Expect = 9.1
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +2
Query: 548 SQLKTLFYSLNMWPETASIR---TRNYIEVWAALDDECLKRLKN 670
SQ K F +L WP S+R RNY E + C K L+N
Sbjct: 111 SQQKADFTALRSWPSACSVRLPTCRNYRETLGGIPQHCAKWLRN 154
>UniRef50_Q7RRG5 Cluster: Triosephosphate isomerase, putative; n=4;
Plasmodium (Vinckeia)|Rep: Triosephosphate isomerase,
putative - Plasmodium yoelii yoelii
Length = 300
Score = 32.7 bits (71), Expect = 9.1
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 215 KLKPGYTRSIHSSTGLFIKMYMEKENEYAYSVLENKGYAINIYTK 349
K+K +T I + T L IK Y K+N YS + NK IN+ T+
Sbjct: 49 KIKDNHTYDIKTWTKLGIKRYTNKKNNEVYSFINNKN--INLETE 91
>UniRef50_A7RNH0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 420
Score = 32.7 bits (71), Expect = 9.1
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -3
Query: 513 SMKLSNISLDMHKL---CCEQYFPNIGNISKISWVVFLVQSSL 394
S K +I +D +L C E YFPN GN+S++ FLV + L
Sbjct: 57 SEKTGSICMDYAQLAAKCTEVYFPNKGNVSRVVVNAFLVFTQL 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,812,784
Number of Sequences: 1657284
Number of extensions: 13105827
Number of successful extensions: 35634
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 33989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35614
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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