Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11i14
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 46 3e-05
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 44 8e-05
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 31 2e-04
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 31 2e-04
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 41 0.001
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 41 0.001
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 39 0.003
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 37 0.013
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 32 0.48
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.48
U49449-1|AAB00117.1| 339|Caenorhabditis elegans olfactory recep... 31 0.64
U42830-6|AAC48279.2| 339|Caenorhabditis elegans Odorant respons... 31 0.64
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 31 0.84
Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical pr... 31 1.1
U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC025724-5|AAG23374.1| 264|Caenorhabditis elegans Hypothetical ... 29 4.5
AF100656-10|AAF99967.1| 301|Caenorhabditis elegans Hypothetical... 28 5.9
U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of ... 28 7.8
U39647-6|AAM51529.1| 505|Caenorhabditis elegans Twik family of ... 28 7.8
U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of ... 28 7.8
U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of ... 28 7.8
U39647-3|AAW30673.1| 512|Caenorhabditis elegans Twik family of ... 28 7.8
U39647-2|AAM51530.1| 498|Caenorhabditis elegans Twik family of ... 28 7.8
AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative pota... 28 7.8
AF083649-1|AAC32860.1| 381|Caenorhabditis elegans putative pota... 28 7.8
AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative pota... 28 7.8
AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative pota... 28 7.8
AF083644-1|AAC32855.1| 498|Caenorhabditis elegans putative pota... 28 7.8
AF083643-1|AAC32854.1| 512|Caenorhabditis elegans putative pota... 28 7.8
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/147 (22%), Positives = 64/147 (43%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKALSIYLRQISQNLITFINLRSFHQIISIPYSDKGQFSNNDAIL 358
C+ +YQGA F+E ET A+ ++++ + TF+ S+ QI+ P+ + + +ND
Sbjct: 293 CSEIYQGAYAFSEPETAAVRDFVQR--HRISTFLTFHSYSQILMYPFGHQVRTYSNDLND 350
Query: 359 VRNSTIFYYILTS*SKENEFRHS*NIKMEILNTVCERIHKIHGVSYFYGNTASLIYNFSG 538
+R++ + + + ++ ++ Y G A +Y SG
Sbjct: 351 LRSTAL--------------------------SAAQALNSVYNTQYKVGTGADTLYPASG 384
Query: 539 NSADWVKKELNIPAVFTVYLNYENSVY 619
S DW K + ++ F L E V+
Sbjct: 385 GSEDWAKGKAHVKYSFLFELRPEEQVW 411
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 470 IHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYLNYENSVYPH 625
+++++G Y G A L+Y SG S DW K +L +P + + L +N++ H
Sbjct: 357 LYELYGTKYQVGTGADLMYEASGGSHDWAKGQLKVPYAYLIELRPKNTMMGH 408
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKALSIYLRQISQNLITFINLRSFHQIISIPYSDKGQ 334
C+ Y G+ F+E E++A+ +L Q + FI+L S+ Q+ IPY + Q
Sbjct: 287 CHDTYHGSAAFSEPESQAVRDFLEQNTPE--AFISLHSYSQMWLIPYGHRKQ 336
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 470 IHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYLNYENSVYPH 625
+++++G Y G A L+Y SG S DW K +L +P + + L +N++ H
Sbjct: 357 LYELYGTKYQVGTGADLMYEASGGSHDWAKGQLKVPYAYLIELRPKNTMMGH 408
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKALSIYLRQISQNLITFINLRSFHQIISIPYSDKGQ 334
C+ Y G+ F+E E++A+ +L Q + FI+L S+ Q+ IPY + Q
Sbjct: 287 CHDTYHGSAAFSEPESQAVRDFLEQNTPE--AFISLHSYSQMWLIPYGHRKQ 336
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 31.5 bits (68), Expect(2) = 2e-04
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 170 NKECNHVYQGAKGFTEEETKALSIYL--RQISQNLITFINLRSFHQIISIPYS 322
N C+ +QG + F+E ET+A+ ++ +I L +++ + Q+ +PY+
Sbjct: 198 NNPCSDEFQGPRPFSEPETRAVRDFIMSSEIYGRLYALVSMHTHGQLWILPYN 250
Score = 31.1 bits (67), Expect(2) = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 440 MEIL-NTVCERIHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYL 598
+EIL N +R+ Y G A ++ +G + DW+KK V+ + L
Sbjct: 263 LEILANRAADRVFAYRETKYRVGTAADMLGTATGGATDWIKKNTPTKYVYVLEL 316
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 31.5 bits (68), Expect(2) = 2e-04
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 170 NKECNHVYQGAKGFTEEETKALSIYL--RQISQNLITFINLRSFHQIISIPYS 322
N C+ +QG + F+E ET+A+ ++ +I L +++ + Q+ +PY+
Sbjct: 198 NNPCSDEFQGPRPFSEPETRAVRDFIMSSEIYGRLYALVSMHTHGQLWILPYN 250
Score = 31.1 bits (67), Expect(2) = 2e-04
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 440 MEIL-NTVCERIHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYL 598
+EIL N +R+ Y G A ++ +G + DW+KK V+ + L
Sbjct: 263 LEILANRAADRVFAYRETKYRVGTAADMLGTATGGATDWIKKNTPTKYVYVLEL 316
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Frame = +2
Query: 176 ECNHVYQGAKGFTEEETKALSIYL--RQISQNLITFINLRSFHQIISIPYSDKGQFSNND 349
+C+ +YQG+ F+E ET+++ +L +++ + FI L ++ Q+ PYS + D
Sbjct: 303 KCSEIYQGSSAFSESETRSMRDFLTSSELNGKIDAFITLHTYSQMWIHPYSHARKSVPAD 362
Query: 350 AILVRNSTIFYYILTS*SKENEFRHS*NIKMEILNTVCERIHKIHGVSYFYGNTASLIYN 529
+ + EN N++ + + +G Y +G + ++Y
Sbjct: 363 --------VAELVCVD---EN------NVQ-RVGRAAVAALENTYGTKYKFGTGSDILYP 404
Query: 530 FSGNSADWVKKELNIPAVFTVYLNYENSVY 619
+G S DW K L I V+ + L V+
Sbjct: 405 SAGGSDDWAKGTLRIKYVYLLELRPGEDVW 434
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 2/150 (1%)
Frame = +2
Query: 176 ECNHVYQGAKGFTEEETKALSIYL--RQISQNLITFINLRSFHQIISIPYSDKGQFSNND 349
+C+ +YQG+ F+E ET+++ +L +++ + FI L ++ Q+ PYS + D
Sbjct: 303 KCSEIYQGSSAFSESETRSMRDFLTSSELNGKIDAFITLHTYSQMWIHPYSHARKSVPAD 362
Query: 350 AILVRNSTIFYYILTS*SKENEFRHS*NIKMEILNTVCERIHKIHGVSYFYGNTASLIYN 529
+ + EN N++ + + +G Y +G + ++Y
Sbjct: 363 --------VAELVCVD---EN------NVQ-RVGRAAVAALENTYGTKYKFGTGSDILYP 404
Query: 530 FSGNSADWVKKELNIPAVFTVYLNYENSVY 619
+G S DW K L I V+ + L V+
Sbjct: 405 SAGGSDDWAKGTLRIKYVYLLELRPGEDVW 434
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 464 ERIHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYL 598
+ + +++G Y +G +IY FSG S DW K+ L I +T+ L
Sbjct: 326 QELGRMYGTKYRHGTGPEIIYAFSGGSTDWAKETLKIKYSYTIEL 370
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKALSIYLRQISQNLITFINLRSFHQIISIPYSDK 328
C+ +Y G F+E E+KA S +L + L +I L S+ Q+ YS +
Sbjct: 257 CSEIYHGPSAFSEPESKAYSQFLTSLKGRLEAYITLHSYSQLWIYSYSHR 306
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 464 ERIHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYL 598
+ + +++G Y +G +IY FSG S DW K+ L I +T+ L
Sbjct: 326 QELGRMYGTKYRHGTGPEIIYAFSGGSTDWAKETLKIKYSYTIEL 370
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKALSIYLRQISQNLITFINLRSFHQIISIPYSDK 328
C+ +Y G F+E E+KA S +L + L +I L S+ Q+ YS +
Sbjct: 257 CSEIYHGPSAFSEPESKAYSQFLTSLKGRLEAYITLHSYSQLWIYSYSHR 306
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKALSIYLRQISQNLITFINLRSFHQIISIPYSDK 328
C+ +Y G F+E E+KA S +L + L +I L S+ Q+ YS +
Sbjct: 257 CSEIYHGPSAFSEPESKAYSQFLTSLKGRLEAYITLHSYSQLWIYSYSHR 306
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKALSIYLR--QISQNLITFINLRSFHQIISIPYSDKGQ 334
C+++Y G + F+E ET+A+ +L ++ + F+ L S+ Q+ PYS + Q
Sbjct: 323 CSNIYHGEEVFSEPETRAVRNFLATPEMKDRVDAFVTLHSYAQLWIYPYSHEEQ 376
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 467 RIHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYL 598
R+ +++G +Y G A + +G S DW K LN+ V+ + L
Sbjct: 395 RLSRVYGTNYRMGTGADTLSPAAGGSDDWAKSALNVKYVYLIEL 438
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKAL--SIYLRQISQNLITFINLRSFHQIISIPYSDK 328
C+ +YQG F+E E KA+ ++ ++ +I L ++ QI PY K
Sbjct: 288 CSEIYQGPSPFSEPEAKAVRDALLSQRYKGRTDAYITLHTYSQIWIHPYGHK 339
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 179 CNHVYQGAKGFTEEETKAL--SIYLRQISQNLITFINLRSFHQIISIPYSDK 328
C+ +YQG F+E E KA+ ++ ++ +I L ++ QI PY K
Sbjct: 288 CSEIYQGPSPFSEPEAKAVRDALLSQRYKGRTDAYITLHTYSQIWIHPYGHK 339
>U49449-1|AAB00117.1| 339|Caenorhabditis elegans olfactory receptor
Odr-10 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 488 VSYF-YGNTA---SLIYNFSGNSADWVKKELNIPAVFTVYLNYENSV 616
VSYF Y +T + + N N +W+KKE N+ + VY YEN V
Sbjct: 149 VSYFLYPDTEYTEAAVTNVLNNHYNWIKKE-NVSYIAYVYYQYENGV 194
>U42830-6|AAC48279.2| 339|Caenorhabditis elegans Odorant response
abnormal protein10 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.64
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 488 VSYF-YGNTA---SLIYNFSGNSADWVKKELNIPAVFTVYLNYENSV 616
VSYF Y +T + + N N +W+KKE N+ + VY YEN V
Sbjct: 149 VSYFLYPDTEYTEAAVTNVLNNHYNWIKKE-NVSYIAYVYYQYENGV 194
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 464 ERIHKIHGVSYFYGNTASLIYNFSGNSADWVKKELNIPAVFTVYL 598
+ I GVSY YG + ++Y SG S D+++ +P ++ V L
Sbjct: 369 QAIKNTTGVSYSYGTISEMMYPASGTSIDFMQHR-GVPYIYGVEL 412
>Z81044-3|CAB02808.1| 178|Caenorhabditis elegans Hypothetical
protein C30H6.8 protein.
Length = 178
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 236 SIYLRQISQNLITFINLRSFHQIISIPYSDKGQFSNNDAILVRNSTIFYY 385
S +LR S N F ++R+ H + S+P +G N N T+ Y
Sbjct: 8 SSFLRSASGNFTKFASIRNAHFLSSVPMKKRGVDGNLPKDYFENKTVVVY 57
>U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical
protein F54D11.1 protein.
Length = 437
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 422 HS*NIKMEILNTVCERIHKIHGVSYFYGNTASLIYNFSGNSADWV 556
H ++ +L ER+H+ Y T +L+Y F NS D+V
Sbjct: 251 HGIDLSSNMLAIALERLHEEKDSRVKYSITDALVYQFEDNSFDYV 295
>AC025724-5|AAG23374.1| 264|Caenorhabditis elegans Hypothetical
protein Y67D8C.6 protein.
Length = 264
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 554 PSLQSYLRSYILNLQYCHKNMTPHEFYESSHIQYLI 447
PS + RS+ +L Y + PH FY + I YLI
Sbjct: 200 PSFGGFARSWTRHLDYAEAEIYPHLFY-NFEINYLI 234
>AF100656-10|AAF99967.1| 301|Caenorhabditis elegans Hypothetical
protein F49F1.11 protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 329 GQFSNNDAILVRNSTIFYYILTS*SKENEFRH 424
G FS+ND V+ +I +Y TS S E RH
Sbjct: 16 GYFSDNDRKKVKKISIVHYDSTSSSSSEEHRH 47
>U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform e protein.
Length = 544
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 158 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 197
>U39647-6|AAM51529.1| 505|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform a protein.
Length = 505
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 101 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 140
>U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform c protein.
Length = 576
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 158 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 197
>U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform d protein.
Length = 562
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 158 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 197
>U39647-3|AAW30673.1| 512|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform f protein.
Length = 512
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 94 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 133
>U39647-2|AAM51530.1| 498|Caenorhabditis elegans Twik family of
potassium channelsprotein 17, isoform b protein.
Length = 498
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 94 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 133
>AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-1 protein.
Length = 562
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 158 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 197
>AF083649-1|AAC32860.1| 381|Caenorhabditis elegans putative
potassium channel subunitn2P17m3 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 101 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 140
>AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-3 protein.
Length = 544
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 158 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 197
>AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative
potassium channel subunitn2P17m2-2 protein.
Length = 576
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 158 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 197
>AF083644-1|AAC32855.1| 498|Caenorhabditis elegans putative
potassium channel subunitn2P17m1-1 protein.
Length = 498
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 94 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 133
>AF083643-1|AAC32854.1| 512|Caenorhabditis elegans putative
potassium channel subunitn2P17m1-2 protein.
Length = 512
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 578 AVFTVYLNYENSVYPHRNNVKILTDIYSTILEETLHLTES 697
A ++L ++ + + VK + DIYS I+ ET+ LT +
Sbjct: 94 ATVFIWLEADHELEGRKAKVKHVFDIYSQIMNETIALTNN 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,738,605
Number of Sequences: 27780
Number of extensions: 296964
Number of successful extensions: 730
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -