Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i13
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49070-1|CAA88869.1|  384|Caenorhabditis elegans Hypothetical pr...    38   0.008
X76116-1|CAA53722.1|  384|Caenorhabditis elegans carrier protein...    38   0.008
U80027-9|AAC48125.1|  199|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF039044-1|AAG24127.1|  272|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z49070-1|CAA88869.1|  384|Caenorhabditis elegans Hypothetical
           protein T09F3.2 protein.
          Length = 384

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +2

Query: 302 KDTAIHLXXXXXXXXXXXXXXCPLEVVKTRLQSSKGVGIPPTQPPPSDNTANN 460
           ++ AIH               CPLEVVKTR+QSS+G+     Q  PS ++ +N
Sbjct: 5   REAAIHFIGGAVGGTTGTAITCPLEVVKTRMQSSRGL---DAQSGPSTSSGSN 54


>X76116-1|CAA53722.1|  384|Caenorhabditis elegans carrier protein
           (c2) protein.
          Length = 384

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = +2

Query: 302 KDTAIHLXXXXXXXXXXXXXXCPLEVVKTRLQSSKGVGIPPTQPPPSDNTANN 460
           ++ AIH               CPLEVVKTR+QSS+G+     Q  PS ++ +N
Sbjct: 5   REAAIHFIGGAVGGTTGTAITCPLEVVKTRMQSSRGL---DAQSGPSTSSGSN 54


>U80027-9|AAC48125.1|  199|Caenorhabditis elegans Hypothetical
           protein T28A11.16 protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 17  VRKYSRVRPVPSAKKIRFTTFTDFNINTCNKSDLCKNIVFEIHFAFQFVRVNC 175
           + K   ++P P   K  +  F  FN    N+ +LCKN++ + +   + V  NC
Sbjct: 122 LEKIGELKPEPQCFK-EWNPFEGFNDKEKNQEELCKNMMGKDNCMKKLVSENC 173


>AF039044-1|AAG24127.1|  272|Caenorhabditis elegans Hypothetical
           protein F48G7.13 protein.
          Length = 272

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 122 KNIVFEIHFAFQFVRVNCVLNEHTKINC 205
           K I F +HF FQFV+   + N +  ++C
Sbjct: 215 KIINFFLHFLFQFVKFELIPNSNFGVSC 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,579,484
Number of Sequences: 27780
Number of extensions: 241595
Number of successful extensions: 793
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)