Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11i12
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0089 - 31565454-31565517,31565594-31565618,31565743-315659... 38 0.008
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 36 0.032
10_08_0779 - 20497718-20498773 35 0.074
07_03_1550 + 27641099-27641288,27641433-27641646,27641738-276418... 34 0.097
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 33 0.23
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 31 0.69
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 31 0.91
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378... 30 1.6
01_01_0026 + 201042-201110,201252-201359,202511-202639,203164-20... 30 2.1
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 29 4.8
05_07_0309 - 29126562-29126604,29126752-29126932,29127277-291274... 29 4.8
05_07_0097 - 27666456-27666719,27666837-27667022,27667233-276673... 29 4.8
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 29 4.8
03_03_0141 + 14779557-14779600,14779686-14779749,14779827-147798... 29 4.8
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 28 6.4
04_04_0782 + 28038292-28038413,28038577-28038778,28039221-280392... 28 8.5
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 28 8.5
>03_06_0089 -
31565454-31565517,31565594-31565618,31565743-31565927,
31566302-31566405,31567148-31567366,31567721-31567903
Length = 259
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 239 ATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEE-EPASSAFAPD 415
A ++ KP +V + WC C++L P +FVM+N+ + + E F +
Sbjct: 135 ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVDNTKWEQELDEFGVE 194
Query: 416 GNYIPRIIFLSPEGSVDHDI 475
G IP FL EG+ + ++
Sbjct: 195 G--IPHFAFLDKEGNEEGNV 212
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 35.9 bits (79), Expect = 0.032
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 KDNGFGRSYIWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKF-ASSIDLQNLSK 352
+D+ ++++ S + +H+ VMV + WC C+ L P + A++ DL L+
Sbjct: 66 QDHPIDETHVFLLSAANFSDFLASHRH-VMVEFYAPWCAHCQALAPDYAAAAADLSPLA- 123
Query: 353 HFVMINLVDEEEPASSAFAPDGNYIPRIIF 442
H V + VD E A D P I+F
Sbjct: 124 HQVALAKVDATEDTDLAQKYDVQGFPTILF 153
>10_08_0779 - 20497718-20498773
Length = 351
Score = 34.7 bits (76), Expect = 0.074
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 113 AGALAKTLCSFIFHKVK-CEAGKDNGFGRSYIWAGSLESGIQIATNHKKPVMVIIHKSW 286
+ + A + C + H+V +AG ++G GR++ W SL S +A + ++++ SW
Sbjct: 76 SSSAASSSCVPLLHRVSWADAGGESGVGRAWAWPPSLASTCGLARLSRDDASLLLNGSW 134
>07_03_1550 +
27641099-27641288,27641433-27641646,27641738-27641843,
27642213-27642257,27642275-27642540,27642980-27642991,
27643201-27643480,27643716-27643823,27644276-27644362,
27644448-27644552,27644995-27645125,27645249-27645309
Length = 534
Score = 34.3 bits (75), Expect = 0.097
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 248 HKKP--VMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASSA 403
H+ P V V+ C C+ LKP + ID N HFV I++ ++ E A +A
Sbjct: 444 HESPRLVCVLYTSPTCGPCRTLKPILSKVIDEYNEHVHFVEIDIEEDPEIAEAA 497
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 251 KKPVMVI-IHKSWCTACKKLKPKFASSIDLQNLSKH 355
K P MV+ + WC CKKL P++ + Q LSKH
Sbjct: 56 KHPFMVVEFYAPWCGHCKKLAPEYEKA--AQELSKH 89
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 254 KPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASSAFAPDGNYIPR 433
K V+V + WC CKKL P + K V+ + S F G P
Sbjct: 403 KNVLVEFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPSEFDVQG--YPT 460
Query: 434 IIFLSPEGSV 463
+ F++P G +
Sbjct: 461 LYFVTPSGKM 470
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 191 GRSYIWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSI-DLQNLSKHFVMI 367
GR ++ S + ++I++ V + SWC C++ PK + +L + K+F ++
Sbjct: 15 GRDFLLRNSADQ-VKISSIEASTVALYFSASWCPPCRRFTPKLIEAYNELVSQGKNFEVV 73
Query: 368 NLV-DEEEPASSAF 406
+ D+++ A A+
Sbjct: 74 FVSGDKDQEAFDAY 87
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 236 IATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINL-VDEEEPASSAFAP 412
I + K ++V + WC CK L P + + L V+ NL D+ + + +
Sbjct: 132 IVLDENKDILVEFYAPWCGHCKHLAPIYEKLASVYKLDDGVVIANLDADKHKDLAEKYGV 191
Query: 413 DGNYIPRIIFLSPEGSVDHDIYN 481
G P + F P+G+ + Y+
Sbjct: 192 SG--YPTLKFF-PKGNKAGEDYD 211
>03_04_0013 +
16436438-16436536,16437257-16437742,16437791-16437826,
16437835-16438323,16438951-16439622
Length = 593
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +2
Query: 191 GRSYIWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSI-DLQNLSKHFVMI 367
GR ++ S + ++I++ V + SWC C++ PK + +L + K F ++
Sbjct: 22 GRDFLLRNSADK-VKISSIKASTVALYFSASWCPPCRRFTPKLIEAYNELVSQGKSFEVV 80
Query: 368 NLV-DEEEPASSAF 406
+ D ++ A +A+
Sbjct: 81 FVSGDSDQDAFNAY 94
>01_01_0026 +
201042-201110,201252-201359,202511-202639,203164-203440,
203543-203647,203730-203875,204042-204149,204290-204378,
204552-205098
Length = 525
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -2
Query: 479 CRCHGQPILLA-TGILSWVC 423
CRCHG+PI LA T W+C
Sbjct: 117 CRCHGRPIDLANTNKAKWMC 136
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 233 QIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVD---EEEPASSA 403
++ T K +V WC CKKL P++ + +NL K V + VD E+ SS
Sbjct: 177 KLVTKSKDLWIVEFFAPWCGHCKKLAPEWKKA--AKNL-KGQVKLGHVDCDAEKNTNSSV 233
Query: 404 FAPDGNYIPRIIFLSPEGSVDHDIYNEDGSSQHKYFYSKPEQIVKS 541
++ D +Y + EG ++ D S Y ++ ++S
Sbjct: 234 WSVDKSYRSLMSKYKVEGFPTILVFGADKESPFPYQGARVASAIES 279
>05_07_0309 -
29126562-29126604,29126752-29126932,29127277-29127442,
29127519-29127724,29127814-29128153
Length = 311
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Frame = +2
Query: 137 CSFIFHKVKCEAGKDNGFGRSYIWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPK 316
CS + AG++ G G AG G+Q+ +HKS+ C +L+
Sbjct: 5 CSGDYSTAGQRAGEEGGGGGG---AGLRLFGVQLHAAAASSPASYLHKSYSMDCLRLQVS 61
Query: 317 FASSIDLQNLSKHFVMINL---VDE--EEPASSAFAPDG 418
SS+ + S + +L +DE E PA+ + DG
Sbjct: 62 SPSSLQSSSSSPSPLTSSLLLSIDEGCERPAADGYLSDG 100
>05_07_0097 -
27666456-27666719,27666837-27667022,27667233-27667387,
27667488-27667620,27667718-27667908,27668078-27668513
Length = 454
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +2
Query: 203 IWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDE 382
++ G+L SG++IA + K W C+ K S+ N ++ +E
Sbjct: 174 VYKGTLSSGVEIAV---VSTTIKSSKDWSKHCEDCFRKKIESLSRINHKNFINLLGFCEE 230
Query: 383 EEPASSA----FAPDG 418
EEP + +AP+G
Sbjct: 231 EEPFTRVMVFEYAPNG 246
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +2
Query: 221 ESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDEEEPASS 400
ES + + +V + WC CKKL P++ + V+I VD +E S
Sbjct: 37 ESTFEKEVGQDRAALVEFYAPWCGHCKKLAPEY-EKLGASFKKAKSVLIAKVDCDEHKSV 95
Query: 401 AFAPDGNYIPRIIFLSPEGSVDHDIY 478
+ P I + P+GS++ Y
Sbjct: 96 CSKYGVSGYPTIQWF-PKGSLEPKKY 120
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 236 IATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINL-VDEEEPASSAFAP 412
+ + K V+V + WC CK L P + + + V+ NL D+ + +
Sbjct: 161 VVLDETKDVLVEFYAPWCGHCKHLAPIYEKLASVYKQDEGVVIANLDADKHTALAEKYGV 220
Query: 413 DGNYIPRIIFLSPEGSVDHDIYN 481
G P + F P+G+ + Y+
Sbjct: 221 SG--FPTLKFF-PKGNKAGEDYD 240
>03_03_0141 +
14779557-14779600,14779686-14779749,14779827-14779860,
14780308-14780438,14780655-14780728,14780869-14780947,
14781054-14781143,14781401-14781474,14782317-14782404,
14782654-14782780,14782864-14782968,14783446-14783569,
14783651-14783702,14784150-14784255,14784770-14784831,
14784912-14784956,14785527-14785625,14785772-14785924
Length = 516
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = -3
Query: 625 IFSIHRMWIRYLLSIELFVFVFFEYFSHRFHDLFGFAVKIFVLAAPVFVVDVMVN 461
++SI W YL+ + L +FF+ S + VK++VLAA +++ ++++
Sbjct: 299 VYSIFGYWGMYLIGVSLGYNLFFDN-SSKGKSRSSQVVKVWVLAASFWIMAIILD 352
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 221 ESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFASSIDLQNLSKHFVMINLVDE 382
++ ++ H K V++ WCT C+ P FA + L+ FV ++ VDE
Sbjct: 634 DNTMEEVAEHGKTVVLKFSAIWCTPCRNAAPLFA-ELSLKYPDIVFVSVD-VDE 685
>04_04_0782 +
28038292-28038413,28038577-28038778,28039221-28039246,
28039750-28039969
Length = 189
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 173 GKDNGFGRSYIWAGSLESGIQIATNHKKPVMVIIHKSWCTACKKLKPKFAS-SIDLQNLS 349
G +G RS L+ + + K P ++ SWC C ++ P F S + +NL+
Sbjct: 80 GSSHGNLRSAGSDQQLKQMLDSLKSSKSPAVINYGASWCRVCSQILPPFCRFSNEFKNLT 139
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 233 QIATNHKKPVMVIIHKSWCTACKKLKPKFAS-SIDLQNLSKHFVMINLVDEEEPASSAFA 409
++ N K V++ + WC C+KL P ++ L++ + V+ + S FA
Sbjct: 382 EVVFNSGKNVLLEFYAPWCGHCQKLAPILEEVAVSLKD-DEDVVIAKMDGTANDVPSDFA 440
Query: 410 PDGNYIPRIIFLSPEGSV 463
+G P + F S G++
Sbjct: 441 VEG--YPSMYFYSSGGNL 456
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,769,582
Number of Sequences: 37544
Number of extensions: 396553
Number of successful extensions: 969
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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