Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11i10
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O43242 Cluster: 26S proteasome non-ATPase regulatory su... 177 2e-43
UniRef50_Q1ZXD3 Cluster: 26S proteasome regulatory subunit S3; n... 115 1e-24
UniRef50_Q5AHZ8 Cluster: Likely 26S proteasome regulatory partic... 94 4e-18
UniRef50_Q04908 Cluster: 26S proteasome non-ATPase regulatory su... 93 8e-18
UniRef50_Q9LNU4 Cluster: Probable 26S proteasome non-ATPase regu... 93 8e-18
UniRef50_O42897 Cluster: Probable 26S proteasome regulatory subu... 83 9e-15
UniRef50_Q5KQ43 Cluster: Putative uncharacterized protein; n=1; ... 73 5e-12
UniRef50_Q4P9G1 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-10
UniRef50_A5K825 Cluster: 26S proteasome non-ATPase regulatory su... 69 2e-10
UniRef50_A4RQF9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 66 6e-10
UniRef50_UPI000150A068 Cluster: PCI domain containing protein; n... 58 2e-07
UniRef50_A3KFN0 Cluster: Proteasome (Prosome, macropain) 26S sub... 51 3e-05
UniRef50_A0BUN6 Cluster: Chromosome undetermined scaffold_13, wh... 48 2e-04
UniRef50_A7AT48 Cluster: 26S proteasome non-ATPase regulatory su... 47 5e-04
UniRef50_Q4N2B3 Cluster: Proteasome regulatory component, putati... 43 0.009
UniRef50_Q54CF8 Cluster: CHD gene family protein containing chro... 38 0.25
UniRef50_Q2AY67 Cluster: Phosphoglycerate/bisphosphoglycerate mu... 38 0.33
UniRef50_A7H857 Cluster: Type IV pilus secretin PilQ precursor; ... 36 0.77
UniRef50_A2DB12 Cluster: Beige/BEACH domain containing protein; ... 36 1.3
UniRef50_Q6E7B8 Cluster: DLLregion-14; n=1; Oikopleura dioica|Re... 35 1.8
UniRef50_Q5CVH2 Cluster: 26S proteasomal subunit S3; PINT domain... 34 3.1
UniRef50_UPI0000F2E7E0 Cluster: PREDICTED: similar to putative t... 33 5.4
UniRef50_A4ABI4 Cluster: GGDEF domain protein; n=1; Congregibact... 33 5.4
UniRef50_A7QA28 Cluster: Chromosome undetermined scaffold_69, wh... 33 5.4
UniRef50_A5BD31 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;... 33 5.4
UniRef50_Q4SB00 Cluster: Chromosome undetermined SCAF14678, whol... 33 7.2
UniRef50_Q98222 Cluster: MC054L; n=2; Molluscum contagiosum viru... 33 7.2
UniRef50_A7BXA8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q7YYS3 Cluster: Ankyrin-related protein, possible; n=1;... 33 7.2
UniRef50_Q5CWU8 Cluster: Signal peptide, large secreted protein ... 33 7.2
UniRef50_UPI000069F0D3 Cluster: UPI000069F0D3 related cluster; n... 33 9.5
UniRef50_UPI000069F0D1 Cluster: UPI000069F0D1 related cluster; n... 33 9.5
UniRef50_O86919 Cluster: AAS surface protein; n=5; Firmicutes|Re... 33 9.5
UniRef50_Q23UH2 Cluster: Protein kinase domain containing protei... 33 9.5
UniRef50_Q6C8L6 Cluster: Similarity; n=2; Yarrowia lipolytica|Re... 33 9.5
UniRef50_Q6BZS6 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 9.5
>UniRef50_O43242 Cluster: 26S proteasome non-ATPase regulatory
subunit 3; n=43; Eumetazoa|Rep: 26S proteasome
non-ATPase regulatory subunit 3 - Homo sapiens (Human)
Length = 534
Score = 177 bits (432), Expect = 2e-43
Identities = 84/193 (43%), Positives = 129/193 (66%), Gaps = 3/193 (1%)
Frame = +1
Query: 157 KKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRALPSTRRKLNGNVLRAIINQIYPA 336
+++ D + ++D++EH++Q++KAV+ KEPRF +R LR LPST R+LN VL + + +
Sbjct: 64 QRELDTVTLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTS 123
Query: 337 S-AEKETILSFVENPLPGAVEIE-APRSRSAPKQPV-PEVDTYXXXXXXXXXXXXXXXEE 507
+ A ++ +L F+E P+ +++ PR+ A P+ PEV+ Y +E
Sbjct: 124 NNATRDFLLPFLEEPMDTEADLQFRPRTGKAASTPLLPEVEAYLQLLVVIFMMNSKRYKE 183
Query: 508 ATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHARLRTSTLRND 687
A + S LM K++TQNRR LDL+AAKCY+YH+RV+E +KLDV+R LHARLRT+TLR+D
Sbjct: 184 AQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHD 243
Query: 688 YEGXAVIINCLLR 726
+G A ++N LLR
Sbjct: 244 ADGQATLLNLLLR 256
>UniRef50_Q1ZXD3 Cluster: 26S proteasome regulatory subunit S3; n=1;
Dictyostelium discoideum AX4|Rep: 26S proteasome
regulatory subunit S3 - Dictyostelium discoideum AX4
Length = 504
Score = 115 bits (277), Expect = 1e-24
Identities = 78/225 (34%), Positives = 122/225 (54%), Gaps = 14/225 (6%)
Frame = +1
Query: 94 DVEMKNVESPAAVSDVETADVKK--DADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRA 267
D+EM V++ V+K +A +L DL+++I IDK V +KE RF + VLR
Sbjct: 3 DIEMSEASKTPVVAEEVVDPVQKANEASLLTFADLKKNIGLIDKGVDTKEMRFIISVLRQ 62
Query: 268 LPSTRRKLNGNVLRAIINQIYPA---SAEKETILSFVENPLPGAVEIEAPRSRSAPKQPV 438
S R+KLN VL I+N + + +K +LSF+++ +++I++ + A K+
Sbjct: 63 TQSIRKKLNYKVLNQIVNFAFSHQNHATKKNFLLSFLKSD-GSSMDIDS--TTQAEKETT 119
Query: 439 P---------EVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAAKCY 591
P EV++Y E+AT+CS LM V + R TL +++K +
Sbjct: 120 PSSSSSHLNIEVESYIHLLVLIYLIDQKKYEDATKCSSALMETVQSNTRITLYPLSSKIF 179
Query: 592 FYHSRVFELTNKLDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
FY+S +E+TN L +R L + LRT+TLR++ EG A IIN LLR
Sbjct: 180 FYYSLSYEMTNNLHEVRSTLLSALRTATLRHNDEGQATIINLLLR 224
>UniRef50_Q5AHZ8 Cluster: Likely 26S proteasome regulatory particle
subunit Rpn3p; n=6; Saccharomycetales|Rep: Likely 26S
proteasome regulatory particle subunit Rpn3p - Candida
albicans (Yeast)
Length = 481
Score = 93.9 bits (223), Expect = 4e-18
Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 3/202 (1%)
Frame = +1
Query: 130 VSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRALPSTRRKL--NGN- 300
+ DV+ DV + D L V+++ + + K T+ + R+ +V R L RRKL NGN
Sbjct: 9 MKDVQQDDVSSEIDTL-VKEIEQSFILLSKVATTFDNRYVSKVFRDLGPLRRKLVRNGNS 67
Query: 301 VLRAIINQIYPASAEKETILSFVENPLPGAVEIEAPRSRSAPKQPVPEVDTYXXXXXXXX 480
VL +IN YP + +T L N P +V +A + +PE++ Y
Sbjct: 68 VLATVINNTYPQTHNSKTYLLKYLNESPTSVGNDAMDVDNTTL--IPEIELYIHLLVQVY 125
Query: 481 XXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHAR 660
EE + ++ + + NRR+LD I AK +FY R EL L IR L
Sbjct: 126 LLDTGKLEELNSLGEHVVQLMKSFNRRSLDFIQAKVWFYVCRAKELIGDLYSIRPELSYS 185
Query: 661 LRTSTLRNDYEGXAVIINCLLR 726
LRT+TLR+D E A +I LLR
Sbjct: 186 LRTATLRHDIETTASVITLLLR 207
>UniRef50_Q04908 Cluster: 26S proteasome non-ATPase regulatory
subunit 3; n=2; Caenorhabditis|Rep: 26S proteasome
non-ATPase regulatory subunit 3 - Caenorhabditis elegans
Length = 504
Score = 92.7 bits (220), Expect = 8e-18
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 12/228 (5%)
Frame = +1
Query: 79 MAP-VEDVEMKNVESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMR 255
MAP + ++ +E A DV + KD + +AV++++E + +DK E R
Sbjct: 1 MAPKTGETVVEKMEVDEAKQDVPATEPAKDLNAIAVENIKEQLAALDKG----EEHLITR 56
Query: 256 VLRALPSTRRKLNGNVLRAIINQIYPASAE-KETILSFVE---------NPLPGA-VEIE 402
VL+ LP TR+++N NVL +++ + A+ E +L ++ P+ + V+ +
Sbjct: 57 VLQVLPKTRKQINDNVLYKLVSSHLSSDAQFAEGMLKYLHYTPAADTEVQPMDTSNVKTK 116
Query: 403 APRSRSAPKQPVPEVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAA 582
+P+ P PE D Y EA + +T + +RRTLD +AA
Sbjct: 117 SPKKGVKPVFASPESDCYLRLLVLLHLYAQKKNTEALALGENQLTSIYNFDRRTLDGLAA 176
Query: 583 KCYFYHSRVFELTNKLDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
K ++ ++E +L +G L++RLRT+TLRN E AV+I LLR
Sbjct: 177 KTLYFLCVIYEREGRLFDHQGFLNSRLRTATLRNFSESQAVLICWLLR 224
>UniRef50_Q9LNU4 Cluster: Probable 26S proteasome non-ATPase
regulatory subunit 3a; n=18; Eukaryota|Rep: Probable 26S
proteasome non-ATPase regulatory subunit 3a -
Arabidopsis thaliana (Mouse-ear cress)
Length = 488
Score = 92.7 bits (220), Expect = 8e-18
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Frame = +1
Query: 91 EDVEMKNVESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRAL 270
+DVEMK+ +P+ S + ++ +Q+L+E ID +KE R R +R
Sbjct: 3 QDVEMKDNNTPSQ-SIISSS-------TSTMQNLKEIAALIDTGSYTKEVRRIARAVRLT 54
Query: 271 PSTRRKLNGNVLRAIIN-QIYPASAEKETILSFVENPLPGAVEIEAPRS--RSAPKQPVP 441
R+KL G+VL + ++ + P S + SFV +E++ S ++AP + +P
Sbjct: 55 IGLRQKLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEHDMEVDTASSATQAAPSKHLP 114
Query: 442 -EVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFEL 618
E++ Y EA CS + ++ NRRT+D+IA++ YFY+S +E
Sbjct: 115 AELEIYCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNRRTIDVIASRLYFYYSLSYEQ 174
Query: 619 TNKLDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
T L IRG L A ++TLR+D G ++N LLR
Sbjct: 175 TGDLAEIRGTLLALHHSATLRHDELGQETLLNLLLR 210
>UniRef50_O42897 Cluster: Probable 26S proteasome regulatory subunit
rpn3; n=1; Schizosaccharomyces pombe|Rep: Probable 26S
proteasome regulatory subunit rpn3 - Schizosaccharomyces
pombe (Fission yeast)
Length = 497
Score = 82.6 bits (195), Expect = 9e-15
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Frame = +1
Query: 94 DVEMKNVESPAAVSDVETA-DVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRAL 270
D+++ +V V ET + + +QD+ +I + +A ++PR R LR
Sbjct: 7 DMQVDSVNQEENVDSGETKQNTVTEVPRTVLQDVEANIAALMQATKQRDPRLVYRSLRTT 66
Query: 271 PSTRRKLNGNVLRAIINQIYPA-SAEKETILSFVENPLPGAVEIEAPRSRSAPKQPVPEV 447
+ +LN +VL +I + Y ++ K +L ++ P G + + PEV
Sbjct: 67 SNICHRLNADVLGQLIKKYYSFDNSLKNELLELIDMPQNGD-DSSTSITNGNGNTIFPEV 125
Query: 448 DTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFELTNK 627
D Y E E ++++ ++ + +RRTLD IAAK YFY+ FE N+
Sbjct: 126 DMYLQLLLSMTLYYNEKYEVGAEYIKKVIARLQSYDRRTLDQIAAKLYFYYILFFEKCNR 185
Query: 628 LDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
R L + RT++LR+D E A+++ LLR
Sbjct: 186 SVECRNTLLSVHRTASLRHDSETQAMVLTLLLR 218
>UniRef50_Q5KQ43 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 530
Score = 73.3 bits (172), Expect = 5e-12
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 31/245 (12%)
Frame = +1
Query: 85 PVEDVEMKNVESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLR 264
P + + +N ++ V + E V + + +++ +I I +AVT+ EPRF +RVLR
Sbjct: 5 PEKLADAQNKDAGEKVQETEEKTVVEAVPTVE-EEILNNIALIGRAVTTIEPRFTIRVLR 63
Query: 265 ALPSTRRKLNGNVLRAIINQIY-----------------------PASAEKETILSFVEN 375
L S R+KL N L+ +++ + PA+ E+++ +++
Sbjct: 64 TLTSLRKKLTKNALKTVLDDAFPKGSKTGQTLIASPIFSSLPESAPAATEQQSDAMEIDS 123
Query: 376 PLPGAVEIEAPRSR--------SAPKQPVPEVDTYXXXXXXXXXXXXXXXEEATECSQQL 531
+P A AP + SA +PE Y EA + + +
Sbjct: 124 SIPAAEGTTAPTPKKKFVPPIYSATGDLLPEGIVYLRLLLILANLDAGRVVEAGDFAMET 183
Query: 532 MTKVTTQNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHARLRTSTLRNDYEGXAVII 711
+++ NRRT+D +A K +FY +R +EL +L ++ A +T+ LR D ++
Sbjct: 184 ADLISSWNRRTMDQLAGKIWFYVARAYELQGRLAELQPQFMAIRQTAALRKDETLEVTVL 243
Query: 712 NCLLR 726
N LLR
Sbjct: 244 NLLLR 248
>UniRef50_Q4P9G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 601
Score = 50.4 bits (115), Expect(2) = 1e-10
Identities = 42/122 (34%), Positives = 57/122 (46%), Gaps = 14/122 (11%)
Frame = +1
Query: 403 APRSRSAPKQPV--PEVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLI 576
A S+ A +QP PE+ Y + A++ + ++ +T QNRRTLD +
Sbjct: 153 AQASKPAQRQPEAQPELVAYLRLLTLVLLIDNKKLDAASDEAVASISTITAQNRRTLDHL 212
Query: 577 AAKCYFYHSRVFELTNK------------LDVIRGLLHARLRTSTLRNDYEGXAVIINCL 720
AAK FY R EL + L IR L RT++LR+D E A IIN L
Sbjct: 213 AAKTIFYLGRAQELKAEQAQAKGTRVEGGLTSIRSQLLGLQRTASLRHDTETEATIINLL 272
Query: 721 LR 726
LR
Sbjct: 273 LR 274
Score = 38.3 bits (85), Expect(2) = 1e-10
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 79 MAPVEDVEMKNVESPAAVSDVETADVKKDAD---VLAVQDLREHIRQIDKAVTSKEPRFA 249
M + V ++ +A TA VK ++ +LA+ LR + I+++V+ E RF
Sbjct: 1 MPELVQVSKEDATGASAAETANTAVVKPPSEKEQLLAL--LRHNFLLIERSVSHIEQRFT 58
Query: 250 MRVLRALPSTRRKLNG--NVLRAIINQ-IYPASAEKETILSFVENPLPGAVEIEAPRSRS 420
RVLR LP RRK+ VL + + I + +I + + LP + E P + +
Sbjct: 59 ARVLRTLPYVRRKVGAYPEVLALAVQEGILANGQDDSSIQKHLLSFLPAPYKPEPPSASN 118
Query: 421 A 423
A
Sbjct: 119 A 119
>UniRef50_A5K825 Cluster: 26S proteasome non-ATPase regulatory
subunit 3, putative; n=6; Plasmodium|Rep: 26S proteasome
non-ATPase regulatory subunit 3, putative - Plasmodium
vivax
Length = 519
Score = 68.5 bits (160), Expect = 2e-10
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 9/220 (4%)
Frame = +1
Query: 94 DVEMKNVESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRALP 273
D E K E+ + ETA K+D + V +L I I+ A+ K+ R+ +R+L+ +
Sbjct: 15 DKEAKG-EAAKETAAKETA-AKEDGSTIFVNNLLTSINNINSAIVYKDNRYILRMLKYIK 72
Query: 274 STRRKLNGN------VLRAIINQIYPASAEKETILS-FVEN--PLPGAVEIEAPRSRSAP 426
R + ++ ++I++ + IL+ +++ LP V +
Sbjct: 73 CMRLSIKNESATLMPIMISLISKTFKEGYPIYEILAKYIDEFRELPKEVPDFLNINEKTY 132
Query: 427 KQPVPEVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSR 606
PE++ + EA + S ++ ++T NRR+LD + AK YFY S
Sbjct: 133 THAAPEIEVFFYIMVLLYLLDNKCYNEAMDLSTVIVNRITKLNRRSLDCMNAKVYFYFSW 192
Query: 607 VFELTNKLDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
V EL KL +R L R + L D V++N +LR
Sbjct: 193 VHELGGKLSQVRQKLLYIYRNACLHRDIMTQTVVLNLILR 232
>UniRef50_A4RQF9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 445
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/97 (34%), Positives = 52/97 (53%)
Frame = +1
Query: 436 VPEVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFE 615
+PE + Y E+A EC+++ + ++ NRR++D++AA+ YFY+S +E
Sbjct: 71 LPEAEVYAYLVVLMHLIDGERGEDALECAREAVDRIKQFNRRSMDVLAARVYFYYSLAYE 130
Query: 616 LTNKLDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
L+ R L A RTS LR D G ++N LLR
Sbjct: 131 RFGSLEDARATLLALYRTSALRLDEIGQETLVNLLLR 167
>UniRef50_UPI000150A068 Cluster: PCI domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: PCI domain containing
protein - Tetrahymena thermophila SB210
Length = 483
Score = 58.0 bits (134), Expect = 2e-07
Identities = 44/216 (20%), Positives = 95/216 (43%)
Frame = +1
Query: 79 MAPVEDVEMKNVESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRV 258
M+ +D + N ++ A + + VKK +L ++LR + I+KA+T + + +
Sbjct: 1 MSQAKD-DKNNKDNQAKKVEKKEEVVKKPVTLL--EELRNQVLTIEKAITQSDLKTVQKT 57
Query: 259 LRALPSTRRKLNGNVLRAIINQIYPASAEKETILSFVENPLPGAVEIEAPRSRSAPKQPV 438
+ + ++ L + I I+P E SF + + + +
Sbjct: 58 CKGMRRFKKYLKSHHFAKIWAAIFPNETE-YNFESFEDFDKTFEENFDISKKKVQKISKA 116
Query: 439 PEVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFEL 618
PE D + ++A + + +L +V+ N++ + ++A YFY++R E+
Sbjct: 117 PEFDFFFKILLLCYFLQINKVDQAYDLAGKLFNRVSEVNKKHFEQLSAFVYFYYARTREI 176
Query: 619 TNKLDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
N++ IR L R + ++++ A +IN +LR
Sbjct: 177 KNQIIEIREELFEAYRLACIKHNDLAQATLINAILR 212
>UniRef50_A3KFN0 Cluster: Proteasome (Prosome, macropain) 26S
subunit, non-ATPase, 3; n=1; Mus musculus|Rep:
Proteasome (Prosome, macropain) 26S subunit, non-ATPase,
3 - Mus musculus (Mouse)
Length = 221
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +1
Query: 622 NKLDVIRGLLHARLRTSTLRNDYEGXAVIINCLLR 726
+KLDV+R LHARLRT+TLR+D +G A ++N LLR
Sbjct: 2 DKLDVVRSFLHARLRTATLRHDADGQATLLNLLLR 36
>UniRef50_A0BUN6 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 484
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +1
Query: 502 EEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHARLRTSTLR 681
E+ +QL+ +V N+R LD + Y Y S+ E KLD IR +L R +
Sbjct: 141 EQLIVIGKQLLQQVQQNNKRYLDTLLGVIYEYLSKSHEKLGKLDQIRDVLFEGYRNACQN 200
Query: 682 NDYEGXAVIINCLLR 726
D G A++IN +LR
Sbjct: 201 RDENGQAILINLILR 215
>UniRef50_A7AT48 Cluster: 26S proteasome non-ATPase regulatory
subunit 3; n=1; Babesia bovis|Rep: 26S proteasome
non-ATPase regulatory subunit 3 - Babesia bovis
Length = 512
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 502 EEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHARLRTSTLR 681
EEA + ++ L V + +D +AAK YFY++R FEL + + R L R + L
Sbjct: 154 EEAMQFAEHLAKYVLEFKSKIMDHLAAKVYFYYARAFELGGRFNQTRTFLMNVYRKACLH 213
Query: 682 NDYEGXAVIINCLLR 726
++ AV NC++R
Sbjct: 214 HEPMTEAVTFNCVVR 228
>UniRef50_Q4N2B3 Cluster: Proteasome regulatory component, putative;
n=2; Theileria|Rep: Proteasome regulatory component,
putative - Theileria parva
Length = 510
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +1
Query: 502 EEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHARLRTSTLR 681
++A + + L + + NRR +D + AK YFY+SR FEL + R + + L
Sbjct: 164 DKAMDLADSLAHLMLSLNRRIMDYLGAKVYFYYSRSFELGGRFKDAR-------KKACLH 216
Query: 682 NDYEGXAVIINCLLR 726
+D AV NC+LR
Sbjct: 217 HDPMTQAVTFNCILR 231
>UniRef50_Q54CF8 Cluster: CHD gene family protein containing
chromodomain, helicase domain, and DNA-binding domain;
n=1; Dictyostelium discoideum AX4|Rep: CHD gene family
protein containing chromodomain, helicase domain, and
DNA-binding domain - Dictyostelium discoideum AX4
Length = 3071
Score = 37.9 bits (84), Expect = 0.25
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +1
Query: 109 NVESPAAVSDVETADVKKDADVLAVQDL---REHIRQIDKAVTSKEPRFAMRVLRALPST 279
N+ES + + E + ++D +V A R +RQI+ A T+K+P + + P T
Sbjct: 313 NIESEESSEEEEEEEEEEDEEVQASSSSSSSRRGVRQIN-ATTAKKPPASKSKSQPSPPT 371
Query: 280 RRKLNGNVLRAIINQIYPASAEKETILSFVENPL---PGAVEIEAPRSRSAPKQP 435
LNG R +N+I S E + E P+ V I+ S+ A P
Sbjct: 372 SNSLNGKRRRTPLNKIESESEESDESSDEYETPITTSKSKVPIKKGGSKKAAASP 426
>UniRef50_Q2AY67 Cluster: Phosphoglycerate/bisphosphoglycerate
mutase; n=10; Bacillus cereus group|Rep:
Phosphoglycerate/bisphosphoglycerate mutase - Bacillus
weihenstephanensis KBAB4
Length = 200
Score = 37.5 bits (83), Expect = 0.33
Identities = 28/100 (28%), Positives = 46/100 (46%)
Frame = +1
Query: 130 VSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRALPSTRRKLNGNVLR 309
+S + + + + + RE ++Q D T KE + + A+ S + + + R
Sbjct: 3 ISFIRHGRLDSTIEPMTIISFREWMKQYDLGTTVKETPIPIETIEAIESAKLVVTSDQRR 62
Query: 310 AIINQIYPASAEKETILSFVENPLPGAVEIEAPRSRSAPK 429
A+ ++AE LSFV+NPL E E P S APK
Sbjct: 63 AV-----QSAAELLDSLSFVQNPL--FREAEVPTSFYAPK 95
>UniRef50_A7H857 Cluster: Type IV pilus secretin PilQ precursor;
n=2; Anaeromyxobacter|Rep: Type IV pilus secretin PilQ
precursor - Anaeromyxobacter sp. Fw109-5
Length = 893
Score = 36.3 bits (80), Expect = 0.77
Identities = 32/110 (29%), Positives = 50/110 (45%)
Frame = +1
Query: 115 ESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRALPSTRRKLN 294
+ P V D+ ADV K A LAV+ + I +I A E RV+ AL + R
Sbjct: 59 DPPRLVIDLAGADVSKLATPLAVK--KGGIAEITTAQYQDERSSVGRVIVALDAARPYEI 116
Query: 295 GNVLRAIINQIYPASAEKETILSFVENPLPGAVEIEAPRSRSAPKQPVPE 444
A++ ++ P A+ ++ + P P V +A R+AP+ PE
Sbjct: 117 APRGDAVVVRVLPEGAKPAAAVTSTDTPSPLVVR-QAHHERAAPESARPE 165
>UniRef50_A2DB12 Cluster: Beige/BEACH domain containing protein;
n=1; Trichomonas vaginalis G3|Rep: Beige/BEACH domain
containing protein - Trichomonas vaginalis G3
Length = 2679
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 183 NS*YISIFLYIRCLNVTNSCRTFHIFHFNIFHWSHCIYN 67
NS Y+S L+I C++ + + F +HFNI+H+S YN
Sbjct: 95 NSNYLSRVLHI-CIDFIKNTKDFEQYHFNIYHYSVQYYN 132
>UniRef50_Q6E7B8 Cluster: DLLregion-14; n=1; Oikopleura dioica|Rep:
DLLregion-14 - Oikopleura dioica (Tunicate)
Length = 525
Score = 35.1 bits (77), Expect = 1.8
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +1
Query: 238 PRFAMRVLRALPSTRRKLNGNVLRAIINQIYPASAEKETILSFVENPLPGAVEIE----- 402
PR + ++ RA+ R KLN + R + + P E I+ P A+ I+
Sbjct: 224 PRKSRKLKRAIKRLRSKLNTDRTRPLADDEKPIKVEAAPIVKSEPQPTTSAIIIQNGRRL 283
Query: 403 APRSRSAPKQPVPEV 447
+ +S AP QP+P V
Sbjct: 284 SHKSEPAPDQPIPSV 298
>UniRef50_Q5CVH2 Cluster: 26S proteasomal subunit S3; PINT domain
containing protein; n=2; Cryptosporidium|Rep: 26S
proteasomal subunit S3; PINT domain containing protein -
Cryptosporidium parvum Iowa II
Length = 551
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 502 EEATECSQQLMTKVTTQNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHARLRTSTLR 681
+E E S+ L +T+D + +K +++SR+ E+ + IR + R + L
Sbjct: 197 QECLEFSKILFDYCRRSTSQTMDQLISKVLYFYSRIHEICGEFTNIRNDVLESYRNAVLN 256
Query: 682 NDYEGXAVIINCLLR 726
++ A IN +LR
Sbjct: 257 HNNMTQAACINLILR 271
>UniRef50_UPI0000F2E7E0 Cluster: PREDICTED: similar to putative
transcriptional repressor E2F-6; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to putative
transcriptional repressor E2F-6 - Monodelphis domestica
Length = 475
Score = 33.5 bits (73), Expect = 5.4
Identities = 37/161 (22%), Positives = 68/161 (42%)
Frame = +1
Query: 190 LREHIRQIDKAVTSKEPRFAMRVLRALPSTRRKLNGNVLRAIINQIYPASAEKETILSFV 369
L+E + Q+ V EP + VL ++P R L ++ ++ Q P + +
Sbjct: 215 LQEILEQLQGTVLQPEPVNGL-VLHSVPVERVVLQPVPVKGLVLQPKPMKSAE------- 266
Query: 370 ENPLPGAVEIEAPRSRSAPKQPVPEVDTYXXXXXXXXXXXXXXXEEATECSQQLMTKVTT 549
P P AVE + P+ PVP+ T+ +L+ KV+
Sbjct: 267 --PQPAAVEEPGTSKATMPQPPVPKQQGTKRKRSIKRTERSGSLMSLTQRFMELV-KVSP 323
Query: 550 QNRRTLDLIAAKCYFYHSRVFELTNKLDVIRGLLHARLRTS 672
+ L+ +A K + R++++T+ L+ I GLL R + +
Sbjct: 324 EGLLDLNDMAVKLNVHKRRLYDITSVLEGI-GLLEKRAKNT 363
>UniRef50_A4ABI4 Cluster: GGDEF domain protein; n=1; Congregibacter
litoralis KT71|Rep: GGDEF domain protein -
Congregibacter litoralis KT71
Length = 392
Score = 33.5 bits (73), Expect = 5.4
Identities = 25/77 (32%), Positives = 34/77 (44%)
Frame = -3
Query: 619 LVQTLLSDKNSILQQSSQGFFDFE**LLSLVAESILWLLQVCLYPTNVTAQGDANMYPLR 440
L+ TLL+ N +L F L+ A+++ WLL L P AQ D ++ L
Sbjct: 15 LICTLLAGANLMLAVQRTHFVAARVFALAFGAKALTWLLTALLPPDG--AQADLSLLLLN 72
Query: 439 ALAA*GRFVTWELLFLR 389
AL A G W LR
Sbjct: 73 ALGATGMLALWSGFSLR 89
>UniRef50_A7QA28 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 497
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -3
Query: 652 VRDL*SHPTC*LVQTLLSDKNSILQQSSQGFFDF 551
+ L PTC + TLL D NS LQ S GFF F
Sbjct: 167 IEKLTGSPTCPNLSTLLLDLNSDLQMISNGFFQF 200
>UniRef50_A5BD31 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 957
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +2
Query: 182 FRIYENTSDKSIKLLLRKNLDSLCVYLEHCRALAG 286
+RIYE + + I LL LDS C+Y+E +AL G
Sbjct: 282 WRIYEQVAFEEINLLSLAMLDSSCLYMEKGKALKG 316
>UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;
Trichocomaceae|Rep: Contig An08c0290, complete genome -
Aspergillus niger
Length = 1644
Score = 33.5 bits (73), Expect = 5.4
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Frame = +1
Query: 73 YTMAPVEDVEMKNVESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAM 252
YT ED+ K A+ +TA K+ D R R++ KA T PR +
Sbjct: 706 YTKLLSEDMRQKRRTWTRAIEKAKTAHWKQFLD-------RTGERRLWKAATYMRPRESW 758
Query: 253 RVLRALPSTRRKLNGN--VLRAIINQIYP--ASAEKETILSF-VENPLPGAVEIEAPRSR 417
+ AL R + GN A +N +P A A++ET E P E+E RS
Sbjct: 759 SSVPALKVDNRSVTGNQEKAEAFMNTFFPMMAPAQEETPTRIPAELPWQPITELEVYRSL 818
Query: 418 SAPK 429
A K
Sbjct: 819 QAAK 822
>UniRef50_Q4SB00 Cluster: Chromosome undetermined SCAF14678, whole
genome shotgun sequence; n=8; Bilateria|Rep: Chromosome
undetermined SCAF14678, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 2224
Score = 33.1 bits (72), Expect = 7.2
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 166 ADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRALPSTRRKLNGNVLRAIINQIYPASAE 345
A+ L V D +EH IDKA T PR ++V + G+++ + + + PA +
Sbjct: 1916 AEQLCVVDKKEHFWSIDKAETKLAPRLTIQVWDNDKFSFDDYLGHLVMDLNHMLRPAKSP 1975
Query: 346 KETILSFVENP 378
++ L ++ P
Sbjct: 1976 QKCTLQLLDQP 1986
>UniRef50_Q98222 Cluster: MC054L; n=2; Molluscum contagiosum virus
subtype 1|Rep: MC054L - Molluscum contagiosum virus
subtype 1 (MOCV) (MCVI)
Length = 235
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -3
Query: 202 CVLVDPEQLVHQHLSLHP 149
CVLVDPEQ+V +HL+L P
Sbjct: 119 CVLVDPEQVVQRHLALTP 136
>UniRef50_A7BXA8 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. PS|Rep: Putative uncharacterized protein -
Beggiatoa sp. PS
Length = 371
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 235 EPRFAMRVLRALPSTRRKLNGNVLRAIINQIYPASAEKETILSFVENPLPGAVEIEAPRS 414
EP+ A ++ + NG L A++N++ +ETIL ++E +PG +++
Sbjct: 176 EPKEAKLPIKNYDDSELNYNGRNLAAVLNRLEKNDEMRETILEWMELMVPGLENVQSQSE 235
Query: 415 R 417
R
Sbjct: 236 R 236
>UniRef50_Q7YYS3 Cluster: Ankyrin-related protein, possible; n=1;
Cryptosporidium parvum|Rep: Ankyrin-related protein,
possible - Cryptosporidium parvum
Length = 2255
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 342 STSGINLIDNSSQNVTV*LPASARQCSKYTHSESRFFRSNSFID 211
+T+ NL+ SS NVT S + + Y+ S S++F +N+F D
Sbjct: 1470 NTARFNLLGVSSSNVTTFGSRSYSRFTSYSSSSSKYFENNNFAD 1513
>UniRef50_Q5CWU8 Cluster: Signal peptide, large secreted protein with
N terminal ankyrin repeats + 8+ transmembrane domain;
n=2; Cryptosporidium|Rep: Signal peptide, large secreted
protein with N terminal ankyrin repeats + 8+
transmembrane domain - Cryptosporidium parvum Iowa II
Length = 2330
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 342 STSGINLIDNSSQNVTV*LPASARQCSKYTHSESRFFRSNSFID 211
+T+ NL+ SS NVT S + + Y+ S S++F +N+F D
Sbjct: 1545 NTARFNLLGVSSSNVTTFGSRSYSRFTSYSSSSSKYFENNNFAD 1588
>UniRef50_UPI000069F0D3 Cluster: UPI000069F0D3 related cluster;
n=13; Xenopus tropicalis|Rep: UPI000069F0D3 UniRef100
entry - Xenopus tropicalis
Length = 737
Score = 32.7 bits (71), Expect = 9.5
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 247 AMRVLRALPSTRRKLNGNVLRAIINQIYPASAEKETI-LSFVENPLPGAVEIEAPRSRSA 423
A R L A RKL + L +N PASA + + S V++P+P A +++P SA
Sbjct: 153 APRKLSAPVPAPRKLLLSALAPAVNLPVPASAVQSPVPASAVQSPVP-ASAVQSPVPASA 211
Query: 424 PKQPVP 441
+ PVP
Sbjct: 212 VQSPVP 217
>UniRef50_UPI000069F0D1 Cluster: UPI000069F0D1 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069F0D1 UniRef100 entry -
Xenopus tropicalis
Length = 544
Score = 32.7 bits (71), Expect = 9.5
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 247 AMRVLRALPSTRRKLNGNVLRAIINQIYPASAEKETI-LSFVENPLPGAVEIEAPRSRSA 423
A R L A RKL + L +N PASA + + S V++P+P A +++P SA
Sbjct: 265 APRKLSAPVPAPRKLLLSALAPAVNLPVPASAVQSPVPASAVQSPVP-ASAVQSPVPASA 323
Query: 424 PKQPVP 441
+ PVP
Sbjct: 324 VQSPVP 329
>UniRef50_O86919 Cluster: AAS surface protein; n=5; Firmicutes|Rep:
AAS surface protein - Staphylococcus saprophyticus
Length = 1463
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 115 ESPAAVSDVETADVKKDADVLAVQDLREHIRQIDKAVTSKE 237
E A SDV+ D DA+ + D E + Q DKA TS E
Sbjct: 366 EDDVASSDVKQDDTHSDANASDIADQNESVAQNDKAETSNE 406
>UniRef50_Q23UH2 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 1596
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 268 LPSTRRKLNGNVLRAIINQI-YPASAEKETILSFVENPLPGAVEIEAPRSRSAPKQPVPE 444
LPS R +N N+L + N + Y + ++ LS +N P ++ ++ S S+ K + E
Sbjct: 292 LPSKLRSINNNILTKLFNLVSYEKAQNSQSQLSHYQNKTPKSIFYKSSSSHSSNKPQIIE 351
>UniRef50_Q6C8L6 Cluster: Similarity; n=2; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 461
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -3
Query: 169 QHLSLHPLSQRH*QLQDFP--HFSFQHLPLEP 80
QH L PL+ H Q P H S QHLPL+P
Sbjct: 338 QHFPLQPLAPHHLPPQHIPQLHLSQQHLPLQP 369
>UniRef50_Q6BZS6 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 544
Score = 32.7 bits (71), Expect = 9.5
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +1
Query: 139 VETADVKKDADVLAVQDLREHIRQIDKAVTSKEPRFAMRVLRALPSTRRKLNGNVLRAII 318
VE AD D D+ D+ +H+ + D +S RF + ++ L +V + +
Sbjct: 382 VEDADQNDDGDISV--DISDHLARSDITASSPSARFPEKPKLTERLSQVTLKRSVSQLQL 439
Query: 319 NQIYPASAEKETILSFVENPLPGAVEIEAPRS 414
QI P + ++E + +PLP + + P+S
Sbjct: 440 -QISPRTPDQEFQRQLMSSPLPAKITPQRPQS 470
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,772,987
Number of Sequences: 1657284
Number of extensions: 11972323
Number of successful extensions: 33377
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 32113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33358
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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