Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11i06
(730 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02690.1 68417.m00364 hypothetical protein low similarity to ... 36 0.021
At2g35170.1 68415.m04314 MORN (Membrane Occupation and Recogniti... 30 1.4
At4g14730.1 68417.m02265 transmembrane protein-related low simil... 29 2.4
At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / AC... 29 3.2
At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / AC... 29 3.2
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 3.2
At1g03070.1 68414.m00281 expressed protein low similarity to N-m... 29 3.2
At4g17610.1 68417.m02633 tRNA/rRNA methyltransferase (SpoU) fami... 28 5.5
At2g04620.1 68415.m00470 cation efflux family protein potential ... 28 5.5
At1g41900.1 68414.m04840 myosin heavy chain-related similar to M... 28 5.5
At4g40020.1 68417.m05666 hypothetical protein 28 7.3
At3g28770.1 68416.m03591 expressed protein 28 7.3
At2g22795.1 68415.m02704 expressed protein 28 7.3
At5g63550.1 68418.m07976 expressed protein 27 9.6
At5g15020.1 68418.m01761 paired amphipathic helix repeat-contain... 27 9.6
At5g13970.1 68418.m01633 expressed protein 27 9.6
At3g63310.1 68416.m07121 expressed protein low similarity to N-m... 27 9.6
At3g60730.1 68416.m06794 pectinesterase family protein contains ... 27 9.6
At2g33350.1 68415.m04088 hypothetical protein 27 9.6
>At4g02690.1 68417.m00364 hypothetical protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104, NMDA receptor
glutamate-binding subunit [Rattus sp.] GI:8248741;
contains Pfam profile PF01027: Uncharacterized protein
family UPF0005
Length = 248
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/117 (19%), Positives = 50/117 (42%)
Frame = +2
Query: 341 PPLEYDPKTRNDXXXXXXXXXXXMLMCTASFTVLVFITPDMKVFFQRIGLVIGIPAMILI 520
P + +P+ R L+ T + V + +FF GL + + +I+I
Sbjct: 26 PAMHENPELRWGFIRKVYSIIAFQLLATVAVAATVVTVRPIALFFATTGLGLALYIVIII 85
Query: 521 IGLSFVMSCSECARKMPCNIVCLVLAVIGMSTIVSFITVHYNTEILMYAMLATAVVV 691
L + +K P N + L + + ++ +V N ++++ +++ T+VVV
Sbjct: 86 TPLIVLCPLYYYHQKHPVNYLLLGIFTLALAFVVGLTCAFTNGKVILESVILTSVVV 142
>At2g35170.1 68415.m04314 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein
/phosphatidylinositol-4-phosphate 5-kinase-related low
similarity to phosphatidylinositol-4-phosphate 5-kinase
AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains
Pfam profile PF02493: MORN repeat
Length = 484
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 413 LMCTASFTVLVFITPDMKVFFQRIGLVIGIPAMILIIGLSFVMSCS 550
L+C +L+ P + +FF I L I + + +II LSF++S S
Sbjct: 120 LICFHLRFLLLLAVPPLYIFFLVINLRIFLRLVFVIIALSFILSIS 165
>At4g14730.1 68417.m02265 transmembrane protein-related low
similarity to transmembrane protein OTMP [Ovis aries]
GI:9965379
Length = 235
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/94 (21%), Positives = 40/94 (42%)
Frame = +2
Query: 413 LMCTASFTVLVFITPDMKVFFQRIGLVIGIPAMILIIGLSFVMSCSECARKMPCNIVCLV 592
L+ T + +V+ + F + + +IL++ L + +K P N + L
Sbjct: 40 LLVTVGVSAVVYFVRPIPEFITETHRGLAVFFVILLLPLLLLWPLLAFEKKHPINCIVLS 99
Query: 593 LAVIGMSTIVSFITVHYNTEILMYAMLATAVVVF 694
+ + +S V I++ A + TAV+VF
Sbjct: 100 IFTLSISFSVGICCSLSQGRIVLEAAILTAVMVF 133
>At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 362
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 288 KIRTTGGCQEA---TLLIMAHLRWNMIRRLGMIS 380
KI T G C+EA ++I A +WN ++LG +S
Sbjct: 264 KIATEGSCREAQPMAVMISARAKWNAWQKLGNMS 297
>At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 364
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 288 KIRTTGGCQEA---TLLIMAHLRWNMIRRLGMIS 380
KI T G C+EA ++I A +WN ++LG +S
Sbjct: 264 KIATEGSCREAQPMAVMISARAKWNAWQKLGNMS 297
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/88 (21%), Positives = 35/88 (39%)
Frame = +2
Query: 83 PKDKEINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTENERKNPSI 262
P + N N++ N +++N + N NN + D G++ G N + +
Sbjct: 64 PPSPQGNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNN- 122
Query: 263 VVYQFYGAQNQNDWGMSGGNAFDNGAPP 346
G N N+ +GG + + PP
Sbjct: 123 -GNNNNGNNNDNNNQNNGGGSNNRSPPP 149
>At1g03070.1 68414.m00281 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 247
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/94 (21%), Positives = 43/94 (45%)
Frame = +2
Query: 410 MLMCTASFTVLVFITPDMKVFFQRIGLVIGIPAMILIIGLSFVMSCSECARKMPCNIVCL 589
+L A + +VF+ P + VFF + + +++I L + +K P N + L
Sbjct: 50 LLATIAVASTVVFVRP-IAVFFATTSAGLALWIVLIITPLIVMCPLYYYHQKHPVNYLLL 108
Query: 590 VLAVIGMSTIVSFITVHYNTEILMYAMLATAVVV 691
+ + ++ V + ++++ A + T VVV
Sbjct: 109 GIFTVALAFAVGLTCAFTSGKVILEAAILTTVVV 142
>At4g17610.1 68417.m02633 tRNA/rRNA methyltransferase (SpoU) family
protein similar to TAR RNA loop binding protein [Homo
sapiens] GI:1184692; contains Pfam profile PF00588: SpoU
rRNA Methylase (RNA methyltransferase, TrmH) family
Length = 1850
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/87 (22%), Positives = 41/87 (47%)
Frame = +2
Query: 68 KIRTMPKDKEINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTENER 247
KI + + + + S + ++ ++ +T +E+K + N ++ MTR K T E+
Sbjct: 345 KIGLVVDESLVRKQSLHILKSVLSIIEVSETISEKKPEGNSVNRSMTR-----KETWAEK 399
Query: 248 KNPSIVVYQFYGAQNQNDWGMSGGNAF 328
+ S+ V + YG+ + G AF
Sbjct: 400 EAKSLGVGELYGSVDSGLTSQQGWQAF 426
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/86 (22%), Positives = 33/86 (38%)
Frame = -1
Query: 637 HRDERNNCGHSYNR*NKTHNVARHFSGTLRTRHHETQPNN*NHGWYANY*ADPLKKHFHI 458
H + C HS++ + +H H + +H E ++ +H ++ D H H
Sbjct: 547 HAHGGSGCTHSHSHQSHSHKNEEHHQHSDSHKHEEHHQHSDSHKHEEHHEHD---HHHHS 603
Query: 457 GRDKHQNGE*CCAH*HYKNYNEHKTN 380
KH+ C H H + H N
Sbjct: 604 HSHKHEE----CNHNHDHEHQSHSHN 625
>At1g41900.1 68414.m04840 myosin heavy chain-related similar to
Myosin heavy chain, skeletal muscle, extraocular
(MyHC-eo) (SP:Q9UKX3) {Homo sapiens}
Length = 442
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = +2
Query: 470 FFQRIGLVIGIPAMIL----IIGLSFVMSCSECAR 562
FF++ GL IPA IL +GL+F CS R
Sbjct: 44 FFEKCGLFFAIPACILEMLYCLGLAFPQMCSNFVR 78
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 65 KKIRTMPKDKEINENSNEVQENRIT--EHSNEDTANERKSQNNEIHIDMTRLG 217
KKI K +E EN E +E++ EHS + E+K Q ++ + D +G
Sbjct: 396 KKIEEKEKKEEKKENKKEKKESKKEKKEHSEKKEDKEKKEQTHQ-NFDKRMIG 447
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 92 KEINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTENERK 250
K NE+S E ++ ++ SNE N+ ++ ++I +GD K E K
Sbjct: 469 KTNNESSKE-EKREESQRSNEVYMNKETTKGENVNIQGESIGDSTKDNSLENK 520
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 65 KKIRTMPKDKEINENSNEVQENRITEHSNEDTANERKSQNNE 190
K+ T K+KE +SNE QEN TE ++ E + + +E
Sbjct: 616 KEKETETKEKE-ESSSNESQENVNTESEKKEQVEENEKKTDE 656
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 95 EINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTENERK 250
E++ EV++ ITE N T +E + + E + ++VKG E E K
Sbjct: 464 ELSHRKPEVKDV-ITEAINAMTDDEEEDEEEEAEAGSDKEKEEVKGEEEEEK 514
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing
protein similar to transcription co-repressor Sin3
[Xenopus laevis] GI:4960210; contains Pfam profile
PF02671: Paired amphipathic helix repeat
Length = 1377
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 86 KDKEINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTEN 241
+D + E++ TEHS E + ++E D + G+D GTE+
Sbjct: 979 EDNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDASGTES 1030
>At5g13970.1 68418.m01633 expressed protein
Length = 404
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/36 (30%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 89 DKEINENSNEVQENRITEHSNED-TANERKSQNNEI 193
+KE++E+ N +N EH ++D + +E K +++E+
Sbjct: 45 EKELSESLNSFSDNGKQEHESDDLSIDEEKGRSSEL 80
>At3g63310.1 68416.m07121 expressed protein low similarity to
N-methyl-D-aspartate receptor-associated protein
[Drosophila melanogaster] GI:567104; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 239
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
Frame = +2
Query: 341 PPLEYDPKTRNDXXXXXXXXXXXMLMCTASFTVLVFITPDMKVFFQRIGLVIGIPAMILI 520
P + P+ R L+ T + V + VFF G IL+
Sbjct: 17 PMMSESPELRWSFIRKVYSIISIQLLVTIAVAATVVKVHSISVFFTTT--TAGFALYILL 74
Query: 521 IGLSFVMSCS--ECARKMPCNIVCLVLAVIGMSTIVSFITVHYNTEILMYAMLATAVVV 691
I ++ C +K P N + L + + ++ V + ++++ +++ TAVVV
Sbjct: 75 ILTPLIVMCPLYYYHQKHPVNYLLLGIFTVALAFAVGLTCAFTSGKVILESVILTAVVV 133
>At3g60730.1 68416.m06794 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 519
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 679 GRQHCIHQDLRVVMHRD---ERNNCGHSYNR*NKTHNVARHFSGTLRTRHHETQPNN 518
G + +H ++ V+H + + GH R H AR G R +H T+PN+
Sbjct: 122 GHKPLVHSNVTFVLHEALAFYKKSRGHMKKR---LHGPARQGHGPTRPKHRPTRPNH 175
>At2g33350.1 68415.m04088 hypothetical protein
Length = 440
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 77 TMPKDKEINENSNEVQENRITEHSNEDTANERKSQNNEIHIDMTRLGDDVKGTEN 241
T + E+ SN + E + HSN +T ++ NN + T L DD N
Sbjct: 69 TFNQSSEVTSTSN-ILEKSGSFHSNTNTTTTTENSNNNNNNKNTNLQDDEDDNNN 122
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,221,081
Number of Sequences: 28952
Number of extensions: 353509
Number of successful extensions: 1086
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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