Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i05
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine re...    29   2.3  
AF016668-2|AAO12442.1|  140|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z81050-7|CAB02853.1|  154|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z82080-8|CAD92382.3|  404|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z82080-5|CAD92381.1|   98|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL032625-7|CAN86642.1|  404|Caenorhabditis elegans Hypothetical ...    27   9.4  
AL023854-1|CAH60790.2|  404|Caenorhabditis elegans Hypothetical ...    27   9.4  

>AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 22 protein.
          Length = 328

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 164 FFQKVHL*SSYIITILPTFYFTPSHLISFNFTPIDKNL--KLFNFIAMRFN 310
           FF ++ L  S + TIL  F+FTPS +    +   + NL  K  + I + FN
Sbjct: 87  FFSRLVLRVSPLCTILSPFFFTPSIITKAYYATYNYNLAFKTISQIVISFN 137


>AF016668-2|AAO12442.1|  140|Caenorhabditis elegans Hypothetical
           protein F36H9.8 protein.
          Length = 140

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 158 LRFFQKVHL*SSYIITILPTFYFTPSHLISFNFTPIDKNLKLFNFIAMRFNFF 316
           LR  +K  L S    +I   F+F   H   FNF+  +K  +L N +A  F  F
Sbjct: 46  LRTREKQILFSVRNFSIFLLFFFKNDHRFDFNFSICNKKKELENLLAALFRSF 98


>Z81050-7|CAB02853.1|  154|Caenorhabditis elegans Hypothetical
           protein C50B6.9 protein.
          Length = 154

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 236 HLISFNFTPIDKNLKLFNFIAMRFNFFYRITG*DYRREL 352
           H I  N  P++ + KL   +A  +  F+RI G D+  +L
Sbjct: 89  HGIEDNIVPVENSKKLMQRMASTYKDFHRIPGVDHNFDL 127


>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 323 ITG*DYRRELWYRCGWSM-YASSGRV 397
           IT  DYR   W+  GW   Y S G+V
Sbjct: 402 ITATDYRMRTWFPLGWFFEYGSQGKV 427


>Z82080-8|CAD92382.3|  404|Caenorhabditis elegans Hypothetical
           protein W09G3.7a protein.
          Length = 404

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 540 NIDCVVFSCGLSVS 499
           N+DC V+ CGLS S
Sbjct: 21  NVDCAVYGCGLSAS 34


>Z82080-5|CAD92381.1|   98|Caenorhabditis elegans Hypothetical
           protein W09G3.7b protein.
          Length = 98

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 540 NIDCVVFSCGLSVS 499
           N+DC V+ CGLS S
Sbjct: 21  NVDCAVYGCGLSAS 34


>AL032625-7|CAN86642.1|  404|Caenorhabditis elegans Hypothetical
           protein W09G3.7a protein.
          Length = 404

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 540 NIDCVVFSCGLSVS 499
           N+DC V+ CGLS S
Sbjct: 21  NVDCAVYGCGLSAS 34


>AL023854-1|CAH60790.2|  404|Caenorhabditis elegans Hypothetical
           protein W09G3.7a protein.
          Length = 404

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 540 NIDCVVFSCGLSVS 499
           N+DC V+ CGLS S
Sbjct: 21  NVDCAVYGCGLSAS 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,333,042
Number of Sequences: 27780
Number of extensions: 333408
Number of successful extensions: 691
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)