Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i05
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    23   2.7  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   3.6  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   3.6  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   6.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   6.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.2  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 377 TYSNHIYTTILVYNPIP 327
           TY N IY   + + P+P
Sbjct: 69  TYKNSIYDVSMTFGPVP 85


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 358 IPQFSSIILSRYPIKKIEAHCDKIE*FEIFI 266
           + + +SI L    IKK+ A C  I    I+I
Sbjct: 84  VQELTSIYLDENVIKKLVAECSVISDANIYI 114


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 358 IPQFSSIILSRYPIKKIEAHCDKIE*FEIFI 266
           + + +SI L    IKK+ A C  I    I+I
Sbjct: 84  VQELTSIYLDENVIKKLVAECSVISDANIYI 114


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 311 FFYRITG*DYRRELWYRCGW 370
           + Y I    YR+EL  RC W
Sbjct: 334 WIYAINHPRYRQELQKRCKW 353


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 311 FFYRITG*DYRRELWYRCGW 370
           + Y I    YR+EL  RC W
Sbjct: 334 WIYAINHPRYRQELQKRCKW 353


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 185  TSELFGKTGDATFKGLFYFPIYGHFHRNQTVS 90
            T+ L GKT    F+ +    I   F   QTVS
Sbjct: 935  TNSLVGKTVAVNFRDVIAKSISVKFQEGQTVS 966


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,660
Number of Sequences: 438
Number of extensions: 4416
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)