Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i02
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.7  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   7.7  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   7.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 579  THLRELLLLSLNITLKVIRVHSVINVE 499
            TH  +   LS NIT+K    H+ I+V+
Sbjct: 1441 THTADGSKLSFNITIKPSESHTSIDVD 1467


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 458  TTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSS 342
            T   P P     ++SAG   T  ++ S  ++S+ +S+SS
Sbjct: 937  TQQQPLPPAPAAASSAGVQPTEHSVNSTNVTSINSSSSS 975


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 154 ANLSGLVSRTQTAVKRDFTRGIWHMSCSRRLDGTLASTSLLHNHSNTCSCG 306
           + LS  V   Q+ +  D TR  W ++ S+      AST  + N  +   CG
Sbjct: 79  SQLSSSVGGAQSGLP-DITRHPWLVTASQSALQKFASTDWMSNPFDRVVCG 128


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -2

Query: 458 TTSAPSPFTVKPSTSAGRDLTFCALRSATISSV---RNSTSSLSP 333
           TT AP+  TV P+T+     T   +   T ++V   + +T++++P
Sbjct: 27  TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAP 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,768
Number of Sequences: 2352
Number of extensions: 11155
Number of successful extensions: 64
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)