Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11i02
         (606 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g33720.1 68414.m04169 cytochrome P450, putative similar to SP...    29   1.8  
At3g59910.1 68416.m06686 expressed protein                             28   4.2  
At2g26730.1 68415.m03206 leucine-rich repeat transmembrane prote...    28   4.2  
At4g11960.1 68417.m01904 expressed protein hypothetical protein ...    28   5.5  
At3g05820.1 68416.m00653 beta-fructofuranosidase, putative / inv...    28   5.5  
At5g56050.1 68418.m06993 hypothetical protein                          27   7.3  
At2g28660.1 68415.m03484 copper-binding family protein similar t...    27   7.3  
At1g78760.1 68414.m09179 F-box family protein contains F-box dom...    27   7.3  
At5g08150.1 68418.m00951 hypothetical protein hypothetical prote...    27   9.6  
At3g27020.1 68416.m03380 oligopeptide transporter OPT family pro...    27   9.6  
At1g68330.1 68414.m07805 expressed protein                             27   9.6  

>At1g33720.1 68414.m04169 cytochrome P450, putative similar to
           SP|O64636 Cytochrome P450 76C1 (EC 1.14.-.-)
           {Arabidopsis thaliana}; contains Pfam profile PF00067:
           Cytochrome P450
          Length = 511

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = +1

Query: 94  GKMSGIVKATHRVLQTCVKTAN--LSG--LVSRTQTAVKRDFTRGIWHMSCSR-RLDGTL 258
           G ++ +V A+   ++  +KT +  LSG  +   T++    +F+ G  H S SR R+   L
Sbjct: 78  GCLNSVVIASRDAVREVLKTHDQILSGRYISEATKSNNHHEFSVGWIHPSSSRFRMLRKL 137

Query: 259 ASTSLLHNHSNTCSCGCGLKALHTKGERELVEFLTEEIVAE 381
           ++T L      +  C    KAL  K  +ELV FL+E    E
Sbjct: 138 SATQLF-----SPQCIQATKALRMKKVQELVNFLSESCERE 173


>At3g59910.1 68416.m06686 expressed protein
          Length = 611

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 283 HSNTCSCGCGLKALHTKGERELVEFLTEEIVAERKAQK 396
           +S  C CGC  K L+ KG+ +LVE   E I  ++K  +
Sbjct: 62  NSGEC-CGCSAKKLNFKGDDDLVE--KENIEQQKKLNR 96


>At2g26730.1 68415.m03206 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 658

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +1

Query: 211 RGIWHMSCSRRL-DGTL-ASTSLLHNHSNTCSCGCGLKALHTKGE--RELVEFLTEEIVA 378
           RG+ H+  S +L  G + AS  LLH + +TC    GL  L +       L  +   E++ 
Sbjct: 460 RGLAHLHVSAKLVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSSPPNRLAGYHAPEVLE 519

Query: 379 ERK 387
            RK
Sbjct: 520 TRK 522


>At4g11960.1 68417.m01904 expressed protein hypothetical protein
           F7H19.70 - Arabidopsis thaliana, PID:e1310057
          Length = 313

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 476 LSCFVKTTSAPSPFTVKPSTSAGRDLTFCALRSATISS 363
           ++C    T  P+PFT   S S  R LT   L+++T  S
Sbjct: 18  ITCSSSRTQCPAPFTHGRSISLRRRLTLLPLKASTDQS 55


>At3g05820.1 68416.m00653 beta-fructofuranosidase, putative /
           invertase, putative / saccharase, putative /
           beta-fructosidase, putative similar to neutral invertase
           [Daucus carota] GI:4200165; contains Pfam profile
           PF04853: Plant neutral invertase
          Length = 633

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 20/80 (25%), Positives = 39/80 (48%)
 Frame = +1

Query: 256 LASTSLLHNHSNTCSCGCGLKALHTKGERELVEFLTEEIVAERKAQKVKSLPAEVEGFTV 435
           + S +  H+ S TC+    L  ++TK    +   + E +  + K +  +++  + EG  V
Sbjct: 79  VVSEARSHSASTTCANDTTLDQIYTKNGLNVKPLVVERLKRDEKDE--EAVNEDEEG--V 134

Query: 436 KGDGAEVVLTKQLKDETIRV 495
           K DG E V    +++E  R+
Sbjct: 135 KRDGFEGVKCNDVEEEAWRL 154


>At5g56050.1 68418.m06993 hypothetical protein 
          Length = 283

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
 Frame = -1

Query: 486 CFIFK-LLC*NNFSTVSLY------SKAFDFSRERLDLLCFAFSNYFFCQELYQFSFTFR 328
           CFIF  LL     +T+ LY      +  FD S  +L+ + F    YF    L Q +FT  
Sbjct: 107 CFIFSILLIVFGIATLILYLAVKPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTNP 166

Query: 327 VKRL 316
            K+L
Sbjct: 167 NKKL 170


>At2g28660.1 68415.m03484 copper-binding family protein similar to
           copper homeostasis factor gi:3168840 from Arabidopsis
           thaliana; contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 265

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -2

Query: 476 LSCFVKTTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSSL 339
           LSC   +  +PS F  K +++ G D+      SA +S +R S SSL
Sbjct: 67  LSCR-NSFESPSGFRPKIASARGSDVQIRRKSSADVSDLRRSRSSL 111


>At1g78760.1 68414.m09179 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 452

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 382 VQQLFLLSGTLPVLFHLSCEAPSTRSRS 299
           V++LF+ S TL V+  L CE P  R+ S
Sbjct: 297 VKKLFISSHTLEVIHDLGCELPLFRNLS 324


>At5g08150.1 68418.m00951 hypothetical protein hypothetical protein
           F14K14.2 - Arabidopsis thaliana, EMBL:AC011914
          Length = 144

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 481 ETIRVTFNVNHTVDSDDFEGD 543
           ET RV  N+NH  D DD E D
Sbjct: 95  ETTRVHNNINHDDDDDDDEDD 115


>At3g27020.1 68416.m03380 oligopeptide transporter OPT family
           protein similar to iron-phytosiderophore transporter
           protein yellow stripe 1 [Zea mays] GI:10770865; contains
           Pfam profile PF03169: OPT oligopeptide transporter
           protein
          Length = 676

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 218 IPLVKSRFTAVCVRLTNPLKFAVLTHVCSTLWVALTMPLIFPA---Y*T*CSLF 66
           I LVK +   V ++   PL+FA+  +V        T+P+IFP    Y   CS F
Sbjct: 372 ILLVKKKRDEVFLKDRIPLEFAIAGYVGLAAISTATIPIIFPPLKWYFVLCSYF 425


>At1g68330.1 68414.m07805 expressed protein
          Length = 268

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = -2

Query: 440 PFTVKPSTSAGRDLTFCALRSATISSVRNSTSSLSPFV*SAFNPQPQLQVLEWL 279
           P  +K   S  + +TF   RSA++SS  +S+SS S    S+  P+ ++++ E L
Sbjct: 73  PVQIKKEESLPQTVTFRVPRSASLSSSSSSSSSSSS---SSRAPEKKMRLKELL 123


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,984,865
Number of Sequences: 28952
Number of extensions: 239130
Number of successful extensions: 773
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)