Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11i01
(532 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 236 8e-63
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 236 8e-63
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 155 2e-38
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 155 2e-38
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 154 4e-38
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 154 4e-38
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 154 4e-38
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 153 5e-38
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 153 5e-38
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 153 5e-38
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 153 5e-38
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 153 5e-38
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 153 5e-38
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 153 5e-38
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 153 5e-38
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 153 5e-38
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 1e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 1e-37
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 152 1e-37
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 152 1e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 152 1e-37
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 151 4e-37
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 140 7e-34
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 116 1e-26
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 69 1e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 69 1e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 6e-11
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 59 2e-09
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 59 2e-09
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 54 5e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 51 4e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 4e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 6e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 6e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 6e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 50 1e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 2e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 4e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 7e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 7e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 7e-06
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 46 2e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 46 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 6e-05
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 8e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 8e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 8e-04
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.002
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.007
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.007
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.007
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.013
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.030
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.052
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.12
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.85
At1g47680.1 68414.m05297 hypothetical protein 29 2.6
At4g38340.1 68417.m05420 RWP-RK domain-containing protein simila... 28 4.5
At4g16070.1 68417.m02437 lipase class 3 family protein low simil... 27 6.0
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 6.0
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 6.0
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 27 6.0
At2g19180.1 68415.m02238 expressed protein 27 6.0
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 27 6.0
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 7.9
At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containi... 27 7.9
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 236 bits (577), Expect = 8e-63
Identities = 110/123 (89%), Positives = 116/123 (94%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 410
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
Query: 411 LRP 419
LRP
Sbjct: 121 LRP 123
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 236 bits (577), Expect = 8e-63
Identities = 110/123 (89%), Positives = 116/123 (94%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNN 410
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KCGH+N
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
Query: 411 LRP 419
LRP
Sbjct: 121 LRP 123
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGGTI 284
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 99.5 bits (237), Expect = 1e-21
Identities = 48/92 (52%), Positives = 65/92 (70%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+A
Sbjct: 63 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 284
GKQL D +T DY I+ S LHLVL LRGG +
Sbjct: 123 GKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGGTI 284
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 102 bits (244), Expect = 2e-22
Identities = 49/90 (54%), Positives = 65/90 (72%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+A
Sbjct: 63 KESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 123 GKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 154 bits (373), Expect = 4e-38
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 281
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRLRGGS 381
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 154 bits (373), Expect = 4e-38
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 281
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 154 bits (373), Expect = 4e-38
Identities = 76/91 (83%), Positives = 83/91 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 281
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 152
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 154 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 258
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 152
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 154 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 258
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 152
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 154 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 258
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 350
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 152
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 154 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 258
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.5 bits (160), Expect = 3e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 152
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 154 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 258
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 153 bits (372), Expect = 5e-38
Identities = 76/90 (84%), Positives = 82/90 (91%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 274
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (364), Expect = 5e-37
Identities = 75/90 (83%), Positives = 81/90 (90%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFA
Sbjct: 138 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFA 197
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 198 GKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Score = 146 bits (354), Expect = 8e-36
Identities = 75/90 (83%), Positives = 81/90 (90%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 122
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+D NIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLAD-NIQKESTLHLVLRLRGG 151
Score = 103 bits (246), Expect = 1e-22
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 214 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFA 273
Query: 189 GKQLEDG 209
GKQLE G
Sbjct: 274 GKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 152 bits (369), Expect = 1e-37
Identities = 73/80 (91%), Positives = 77/80 (96%)
Frame = +3
Query: 39 FSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 218
F MQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 73 FRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132
Query: 219 SDYNIQKESTLHLVLRLRGG 278
+DYNIQKESTLHLVLRLRGG
Sbjct: 133 ADYNIQKESTLHLVLRLRGG 152
Score = 148 bits (358), Expect = 3e-36
Identities = 74/91 (81%), Positives = 81/91 (89%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFA 198
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 281
GKQ EDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 199 GKQHEDGRTLADYNIQKESTLHLVLRLRGGS 229
Score = 135 bits (326), Expect = 2e-32
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
+Q++STLHL+LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 151 bits (365), Expect = 4e-37
Identities = 71/76 (93%), Positives = 76/76 (100%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 231 IQKESTLHLVLRLRGG 278
IQKESTLHLVLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 142 bits (343), Expect = 2e-34
Identities = 71/90 (78%), Positives = 78/90 (86%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFA
Sbjct: 141 KESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFA 200
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 201 GKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Score = 136 bits (329), Expect = 9e-33
Identities = 71/91 (78%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFA
Sbjct: 217 KESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFA 276
Query: 189 GKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 278
G+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 277 GEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 120 bits (288), Expect = 8e-28
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +3
Query: 48 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 227
+MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 228 NIQKESTLHLVLRLRGG 278
+IQK+S LHL LRLRGG
Sbjct: 62 SIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 140 bits (338), Expect = 7e-34
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 188
K+S + V+ MQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLIFA
Sbjct: 65 KESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFA 124
Query: 189 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 278
GKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 125 GKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Score = 134 bits (323), Expect = 5e-32
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +3
Query: 48 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 227
T+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 228 NIQKESTLHLVLRLRGG 278
NIQKESTLHLVLRLRGG
Sbjct: 62 NIQKESTLHLVLRLRGG 78
Score = 116 bits (280), Expect = 8e-27
Identities = 58/74 (78%), Positives = 64/74 (86%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 231 IQKESTLHLVLRLR 272
I K+STL+LVLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 108 bits (260), Expect = 2e-24
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLI 182
K S + V F MQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLI
Sbjct: 305 KGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLI 364
Query: 183 FAGKQLEDGRTLSDYNIQKESTLHLVLRLR 272
F GK+L+DG TL+DY+IQKESTLHLVL ++
Sbjct: 365 FLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 108 bits (260), Expect = 2e-24
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
MQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 231 IQKESTLHLVLRLRGG 278
I+ ESTLHL +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 102 bits (245), Expect = 1e-22
Identities = 57/96 (59%), Positives = 70/96 (72%), Gaps = 7/96 (7%)
Frame = +3
Query: 9 KKS*ILRVVYFSNTMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPDQQ 173
K+S + V+ MQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD Q
Sbjct: 141 KESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQ 200
Query: 174 RLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRG 275
RLIF G++L ED RTL+DY I+ STL L LRLRG
Sbjct: 201 RLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRG 236
Score = 99 bits (238), Expect = 9e-22
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
Frame = +3
Query: 51 MQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 215
M IFVK L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 216 LSDYNIQKESTLHLVLRLRGG 278
L+ YNIQK STL+LV R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
Score = 96.3 bits (229), Expect = 1e-20
Identities = 53/83 (63%), Positives = 59/83 (71%), Gaps = 7/83 (8%)
Frame = +3
Query: 51 MQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 209
MQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 210 RTLSDYNIQKESTLHLVLRLRGG 278
RTL DYNIQK ST+H + RGG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 116 bits (278), Expect = 1e-26
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 231 IQKESTLHLVLRL 269
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 231 IQKESTLHLVLRLRGG 278
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/74 (40%), Positives = 50/74 (67%)
Frame = +3
Query: 45 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 224
+T+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+
Sbjct: 22 STLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSE 81
Query: 225 YNIQKESTLHLVLR 266
Y+++ TLHL++R
Sbjct: 82 YHLENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK------------ 194
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 195 -QLEDGRTLSDYNIQKESTLHLVLRL 269
++ D D I E T LVLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 231 IQKESTL 251
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVE-ASDTIE 122
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 64.1 bits (149), Expect = 6e-11
Identities = 31/78 (39%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 42 SNTMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 218
S +QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 219 SDYNIQKESTLHLVLRLR 272
+ Y+I+++++L LV R++
Sbjct: 152 TYYSIEQDASLQLVARMQ 169
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 36 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 212
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 213 TLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 341
+ DY + + + LHLVL+L L++L +K C K CR
Sbjct: 89 NMRDYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 51.6 bits (118), Expect = 3e-07
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 21 ILRVVYFSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 191
IL +V + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 192 KQLEDGRTLSDYNIQKESTLHLVLR 266
++LED ++D +S LHL++R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 36 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 212
Y +T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L
Sbjct: 30 YPDDTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNS 88
Query: 213 TLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 341
+ DY + + + LHLVL+L L++L +K C K CR
Sbjct: 89 NMRDYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 51.6 bits (118), Expect = 3e-07
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 21 ILRVVYFSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 191
IL +V + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 192 KQLEDGRTLSDYNIQKESTLHLVLR 266
++LED ++D +S LHL++R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.4 bits (125), Expect = 5e-08
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 42 SNTMQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 218
S +Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +
Sbjct: 6 SKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI 65
Query: 219 SDYNIQKESTLHLVLRLRGG 278
S Q ++T++LVL LRGG
Sbjct: 66 S----QPDATVNLVLSLRGG 81
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 224
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 225 YNIQKESTLHLVL 263
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 39 FSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRT 215
F++ ++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ +
Sbjct: 7 FTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQR 66
Query: 216 LSDYNIQKESTLHLV 260
LSDY++++ TL+LV
Sbjct: 67 LSDYHVEEGHTLYLV 81
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 63 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 242
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 243 STLHLV 260
T+H+V
Sbjct: 82 HTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 6e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 221
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 222 DYNIQKESTLHLVLRLRGG 278
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 231 IQKESTLHL 257
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 63 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 242
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 243 STLHLV 260
T+H+V
Sbjct: 82 HTVHMV 87
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 231 IQKESTLHLVL 263
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +3
Query: 36 YFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGR 212
Y ++ +F+ +++G T+ + + SD+I VK +IQ G +Q+L+F+G++L +
Sbjct: 30 YSVKSVLVFL-SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNAS 88
Query: 213 TLSDYNIQKESTLHLVLRL 269
+ DY + S LHLVL+L
Sbjct: 89 RVKDYGVTGGSVLHLVLKL 107
Score = 35.5 bits (78), Expect = 0.023
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 30 VVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLE 203
V+ + + + V T GK V+ + +K +I ++ +G P D Q ++F G++L+
Sbjct: 104 VLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLD 163
Query: 204 DGRTLSDYNIQKESTLHLVLR 266
D R + S +HL+++
Sbjct: 164 DNRIIDGICKDGNSVIHLLVK 184
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 227
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 228 NIQKESTLHLVLRLRGGT--IEPSLRILAMKYNCEK 329
Q ++T++LVL LRGG + LR + MK +K
Sbjct: 67 --QSDTTMNLVLSLRGGKGGLGSLLRNVVMKAGQKK 100
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 231 IQKESTL 251
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 231 IQKESTLHL 257
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 221
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 222 DYNIQKESTLHLVL 263
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 221
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 222 DYNIQKESTLHLVL 263
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +3
Query: 30 VVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQL 200
V+ S+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L
Sbjct: 102 VIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEEL 160
Query: 201 EDGRTLSDYNIQKESTLHLVL 263
+D R ++D ++ +HL++
Sbjct: 161 DDQRLITDLCQNGDNVIHLLI 181
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 69 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 245
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 246 TLHLVLRL 269
LHLV+RL
Sbjct: 98 LLHLVIRL 105
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 221
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 222 DYNIQKESTLHLVL 263
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 221
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 222 DYNIQKESTLHLVL 263
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 221
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 222 DYNIQKESTLHLVL 263
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 48 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 224
+M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 225 YNIQKESTLHLV 260
N+Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 221
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 222 DYNIQKESTLHLVL 263
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 48 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 224
TM+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 499 TMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAE 558
Query: 225 YNIQKESTLHLV 260
N+Q S +HL+
Sbjct: 559 QNVQPNSLVHLL 570
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 231 IQKESTLHL 257
I S + L
Sbjct: 61 ILNHSRIQL 69
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 230
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 231 IQKESTLHL 257
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +3
Query: 33 VYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 212
V + + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D
Sbjct: 30 VSIDTMISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHL 89
Query: 213 TLSDYNIQKESTLHL 257
+ I+ S + L
Sbjct: 90 NMFGCQIRHNSRILL 104
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +3
Query: 45 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 224
+T+++ VK GK+I L V T++++K+++Q + P Q+LIF GK L + TL
Sbjct: 534 STIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQ 592
Query: 225 YNIQKESTLHLV 260
++ + L L+
Sbjct: 593 SDVGSGAKLMLM 604
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 164
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVE-ASDTIE 122
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 206
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 191
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 51 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 191
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 78 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 254
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 255 LVLRLRGG 278
L LR RGG
Sbjct: 775 LSLRERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 93 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 206
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 54 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 215
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.052
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 63 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 206
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +3
Query: 93 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 251
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 108 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 248
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 249 LHLVLRL 269
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 102 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 257
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g38340.1 68417.m05420 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 767
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +3
Query: 78 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 257
GK ++ ++ ++EN K K + ++ I D R FAG + + + +TL
Sbjct: 473 GKQVSFSFSSASSLENRKRKTKAEKDITLDTLRQHFAGSLKDAAKNIG----VCPTTLKR 528
Query: 258 VLRLRGGTIEPSLRILAMKYNCEKM 332
+ R G + PS +I + ++ K+
Sbjct: 529 ICRQNGISRWPSRKIKKVGHSLRKL 553
>At4g16070.1 68417.m02437 lipase class 3 family protein low
similarity to calmodulin-binding heat-shock protein
CaMBP [Nicotiana tabacum] GI:1087073; contains Pfam
profile PF01764: Lipase, PF03893: Lipase 3 N-terminal
region
Length = 654
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -3
Query: 437 ILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFNCTS 273
+L + Q SA C + M +A + HF+T I++G + F+ +S
Sbjct: 267 LLTYILREQKEFASATCFTFAPAACMTWDLAESGKHFITTIINGSDLVPTFSASS 321
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 216 LSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNC 380
LS+ +I++E + + + + P NC +C KCY H R+ +C
Sbjct: 136 LSEIDIEREEECGICMEMNNMVVLP---------NCTHSLCIKCYRDWHGRSESC 181
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 185 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 93
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +3
Query: 105 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 284
A +TIE++K +++D+E +++ A Q E + KE L L+ +L +
Sbjct: 154 AEETIESLKNQLKDRERALVLKEKDFEAKLQHEQEERKKEVEKAKEEQLSLINQL--NSA 211
Query: 285 EPSLRILAMKYNCEKMICRK 344
+ + L + + EK +C K
Sbjct: 212 KDLVTELGRELSSEKKLCEK 231
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 468 YNKFPIWLLFNP*SSFWV 415
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 185 CRETIRRWPHSFRL*HPERIHTSPGFE 265
C+ETI+ W H+ + + H PG E
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGME 473
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 72 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 209
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containing
protein low similarity to post-transcriptional control
of chloroplast gene expression CRP1 [Zea mays]
GI:3289002; contains Pfam profile PF01535: PPR repeat
Length = 855
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/90 (20%), Positives = 43/90 (47%)
Frame = +3
Query: 108 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIE 287
+D++ + A I++ G+P Q + +++Y I +V + ++
Sbjct: 106 ADSVNHASAIIKEDVGVPIGDQIFKAGIGNVNLLSDIANYKIPLSDGTEVVGLPKSCMVD 165
Query: 288 PSLRILAMKYNCEKMICRKCYARLHPRATN 377
P+ I +K + K+I R+ A+++PR+ +
Sbjct: 166 PTRPISGVKSSNVKVIRREHLAKVYPRSAD 195
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,478,539
Number of Sequences: 28952
Number of extensions: 244941
Number of successful extensions: 845
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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