Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h24
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0TAP1 Cluster: PTS system, glucose-specific IIBC compo...    34   3.2  
UniRef50_Q97Q70 Cluster: ABC transporter, ATP-binding/permease p...    33   4.2  
UniRef50_Q8YVG6 Cluster: Permease protein of ABC transporter; n=...    33   4.2  
UniRef50_A4RH06 Cluster: Putative uncharacterized protein; n=2; ...    33   7.4  

>UniRef50_Q0TAP1 Cluster: PTS system, glucose-specific IIBC
           component; n=5; Escherichia coli|Rep: PTS system,
           glucose-specific IIBC component - Escherichia coli
           O6:K15:H31 (strain 536 / UPEC)
          Length = 502

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 609 FLTSLVEQVSFATPQSSATISDQILPQRVVLLKEQLLQNALTTFI 475
           F+T     + FA P ++  +  +  P+R  L+K  LL  ALTTF+
Sbjct: 259 FMTGRFPIMMFALPAAALAMYQEAKPERKALIKGLLLSGALTTFV 303


>UniRef50_Q97Q70 Cluster: ABC transporter, ATP-binding/permease
           protein; n=44; Streptococcus|Rep: ABC transporter,
           ATP-binding/permease protein - Streptococcus pneumoniae
          Length = 574

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 191 MFENVPVAVF*AILLFFRLTTPAVVWFSIFIGILTTV 81
           +F   P+ VF AI + +R++     WF + + ILT V
Sbjct: 133 LFLRAPIIVFGAIFMAYRISAELTFWFLVLVAILTIV 169


>UniRef50_Q8YVG6 Cluster: Permease protein of ABC transporter; n=14;
           Bacteria|Rep: Permease protein of ABC transporter -
           Anabaena sp. (strain PCC 7120)
          Length = 335

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 519 LLKEQLLQNALTTFIFFQAGLQLVHTHVFFVILIQ*QLNWFSF 391
           L +  ++ + LTT +FF   L    T + F+I+   QL W  F
Sbjct: 138 LKRHTIIDHVLTTLVFFGFSLPTFFTGLLFIIIFSIQLKWLPF 180


>UniRef50_A4RH06 Cluster: Putative uncharacterized protein; n=2;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 1376

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +1

Query: 295 VPKLAQLENTIMGIMKELTKMPPGSRLPDKFTKTEPIKLLLDQNYKEDVCMD 450
           + K   L+ T   +  ++ + PP     DK+TK+EP  L++  NY  +V +D
Sbjct: 618 IEKTISLKVTEAKLKPKIVEAPPPQERNDKYTKSEPTDLMIG-NYLAEVILD 668


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,803,476
Number of Sequences: 1657284
Number of extensions: 10195636
Number of successful extensions: 24722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24720
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)