Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h21
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   5.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 309  PLSPSSNAFFCV 274
            PL+PSS  FFC+
Sbjct: 973  PLAPSSLFFFCM 984


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 309  PLSPSSNAFFCV 274
            PL+PSS  FFC+
Sbjct: 973  PLAPSSLFFFCM 984


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 324 VFITHPLSPSSNAFFCVNFLKN 259
           +FIT   S  +  FF  NFL N
Sbjct: 232 IFITEHESKPNWLFFLANFLTN 253


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 380 MKLWLQKVGSPKSKIEKAAFRNEGN 454
           +K+W Q   S   K+ KAA  + GN
Sbjct: 165 VKIWFQNRRSKYKKMMKAAQVSGGN 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,488
Number of Sequences: 336
Number of extensions: 2623
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)