Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h19
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   4.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   5.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 640 RYVETDDTVLLMNSNLHLFITRKTNT 717
           RY E +  +L   S  HLF+ R+T T
Sbjct: 177 RYKELNRVILDNMSRNHLFLVRRTET 202


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 267 TVDEMPGSLHPLEERHRYPQQIP 335
           T+DE    +H    R R P++IP
Sbjct: 643 TIDEAASDVHQTHMRIRPPKKIP 665


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 267 TVDEMPGSLHPLEERHRYPQQIP 335
           T+DE    +H    R R P++IP
Sbjct: 643 TIDEAASDVHQTHMRIRPPKKIP 665


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 267 TVDEMPGSLHPLEERHRYPQQIP 335
           T+DE    +H    R R P++IP
Sbjct: 643 TIDEAASDVHQTHMRIRPPKKIP 665


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 267 TVDEMPGSLHPLEERHRYPQQIP 335
           T+DE    +H    R R P++IP
Sbjct: 643 TIDEAASDVHQTHMRIRPPKKIP 665


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 361 KDFKNVYK-FAHRLSRPQITWHELYRSLTLWRQLHLARQHYDEF 489
           K  ++V+K F H +      WHEL        ++ L   H  +F
Sbjct: 76  KQKEDVHKVFQHLMIHRPNWWHELETKFNPHHEIKLQHLHQSKF 119


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 371 KTFTNSLTGSPV 406
           KTF ++LTG+PV
Sbjct: 141 KTFKSTLTGTPV 152


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/36 (19%), Positives = 18/36 (50%)
 Frame = -3

Query: 177 YNNVCKFITTYIEVYSIENHFEVFSVV*FLCNFNIL 70
           YN++C+ +  +  +Y +     +  V+ ++ N   L
Sbjct: 226 YNSICELVDAFNNIYGLAMLEIIIVVITYVLNLTDL 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,903
Number of Sequences: 336
Number of extensions: 3462
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)