Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11h18
(724 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 1.9
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 1.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 1.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 1.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 1.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 1.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 1.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 1.9
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.6
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 467 TSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKSPAHS 589
T T E + + P K R K K +GNGKK + S
Sbjct: 368 THTGEKRFACPICNKRFMRSDHLAKHVKTHNGNGKKGSSDS 408
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ITTSMP-KQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKS 577
++TS P K TST +SSP S+ + T+ S +G+ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ITTSMP-KQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKS 577
++TS P K TST +SSP S+ + T+ S +G+ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ITTSMP-KQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKS 577
++TS P K TST +SSP S+ + T+ S +G+ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ITTSMP-KQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKS 577
++TS P K TST +SSP S+ + T+ S +G+ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ITTSMP-KQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKS 577
++TS P K TST +SSP S+ + T+ S +G+ S
Sbjct: 105 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS 151
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ITTSMP-KQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKS 577
++TS P K TST +SSP S+ + T+ S +G+ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 440 ITTSMP-KQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKS 577
++TS P K TST +SSP S+ + T+ S +G+ S
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS 195
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +2
Query: 524 ITDFLKPRKRLSGNGKKSPAHSHKHECGHGAHIRPPKVARLSQPHFKRTS*AFL 685
I + ++ K S KK HK+ G + + +PH K+ AF+
Sbjct: 434 IVNEMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKKKPHIKKPLNAFM 487
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +2
Query: 524 ITDFLKPRKRLSGNGKKSPAHSHKHECGHGAHIRPPKVARLSQPHFKRTS*AFL 685
I + ++ K S KK HK+ G + + +PH K+ AF+
Sbjct: 326 IVNEMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKKKPHIKKPLNAFM 379
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 367 TGHSEIRVAISTSVCSSGSVKKVTDHNLDAETEYIHPGG*SF 492
T H + + ST+ + +V ++ D D+ Y H SF
Sbjct: 1180 TNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYYPHESCSSF 1221
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,696
Number of Sequences: 336
Number of extensions: 3694
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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