Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11h18
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0076 - 19830482-19831258,19837352-19837613,19838073-19838485 31 0.93
03_05_0675 + 26630466-26632070 31 0.93
11_06_0549 + 24868344-24868930,24869740-24869957,24870018-248701... 31 1.2
03_05_0145 + 21254448-21255488 31 1.2
11_03_0068 + 9564354-9565180,9566658-9568704 30 1.6
08_02_0230 - 14572854-14574632 30 1.6
11_06_0511 - 24434007-24436814 29 3.7
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271... 29 4.9
11_06_0132 - 20431122-20431477,20431739-20433758 28 6.5
10_08_0345 - 16985194-16985260,16985407-16985610,16987780-16988093 28 6.5
08_01_1084 - 11120719-11120950,11121035-11121133,11122446-111228... 28 6.5
06_03_0399 - 20403488-20405092 28 6.5
05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816... 28 6.5
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 28 6.5
04_03_0316 + 14261942-14262506,14262710-14263134 28 6.5
01_05_0714 + 24555494-24555637,24555884-24556071,24556195-245562... 28 6.5
01_03_0212 + 13842142-13842634,13842727-13843319 28 6.5
01_03_0209 - 13820980-13821572,13821665-13822157 28 6.5
12_02_0451 - 19179592-19179648,19179745-19179879,19180214-191802... 28 8.6
08_02_1237 + 25475219-25475916,25476127-25476320,25476407-254773... 28 8.6
04_04_0068 + 22505675-22505930,22506307-22506404 28 8.6
04_03_0197 - 12547382-12547450,12547955-12548231,12549031-12549137 28 8.6
03_06_0154 + 32029133-32029765 28 8.6
02_05_0442 - 29044736-29046604 28 8.6
01_01_0459 + 3400288-3400729,3400760-3400806,3401055-3401141,340... 28 8.6
01_01_0012 + 71903-72935,73468-73981,74619-76008 28 8.6
>11_06_0076 - 19830482-19831258,19837352-19837613,19838073-19838485
Length = 483
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 188 VLDTRSLRVRGVTALDGVRRNLFGCTDREENRRFVERELARQLELDSQRW 337
+ D R + ALD + R CT + NRR +E+A LE+ W
Sbjct: 423 MFDERITEEEDIHALDDIGRLALRCTHPKTNRRPTMKEVAGHLEMIRSSW 472
>03_05_0675 + 26630466-26632070
Length = 534
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 638 PLWEDECEPHDHTRACGCARGTSSRSPIAFSGASRNLL 525
P E+ C D T+ CGCARG SP + + N++
Sbjct: 344 PTVEERCR--DSTQLCGCARGARCVSPCRHASSGSNVV 379
>11_06_0549 +
24868344-24868930,24869740-24869957,24870018-24870175,
24870202-24870633,24870717-24871064
Length = 580
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/152 (18%), Positives = 59/152 (38%)
Frame = +2
Query: 176 ATTTVLDTRSLRVRGVTALDGVRRNLFGCTDREENRRFVERELARQLELDSQRWGFDFAN 355
A TT +++ + +D ++++ C +E ++ E + + + D A
Sbjct: 275 AATTAATLEKVQIEQI--IDKAKQDILQCILQELQQQLPEADKSLEENGDEHATAAIEAK 332
Query: 356 EQPLPGIQRFAWQLVPASAVPVALRRSPITTSMPKQNTSTQEAKVSSPESTKTQKRITDF 535
E P A + PVA + + + K+N ++K+++ +T T + T
Sbjct: 333 ENKPPA----AKDETKENKAPVAQDKHAVAANKTKENIGKIKSKINNEATTATPRPPTTI 388
Query: 536 LKPRKRLSGNGKKSPAHSHKHECGHGAHIRPP 631
L + + H K + G H +PP
Sbjct: 389 STTTTTLGKDQIEEIIHKVKQQVLQGLHHQPP 420
>03_05_0145 + 21254448-21255488
Length = 346
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 476 QEAKVSSPESTKTQKRITDFLKPRKRLSGNGK-KSPAH-SHKHECGHGAHIRPPKVARLS 649
++ + E + ++R + +P K +GNG+ +SP+ S + G G H+ PP R
Sbjct: 108 EKKAIGGMEKGRARRRTPEQRRP-KEAAGNGRARSPSPASAQRRYGGGEHLAPPTRPRRE 166
Query: 650 QP 655
QP
Sbjct: 167 QP 168
>11_03_0068 + 9564354-9565180,9566658-9568704
Length = 957
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3
Query: 422 LPELQTLVLIATRISECPVKVVHLQN 345
L ELQTL L TRI E P +V L+N
Sbjct: 624 LQELQTLELQRTRIKELPKSIVRLKN 649
>08_02_0230 - 14572854-14574632
Length = 592
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 50 FRVIIIK--YLKVKTTSWMLIGVVFRCLDSIEMSALSVRAPGLQATTTVLD-TRSLRVRG 220
FRV+ I LKV TT W+ + + CL ++ + +VR LQ LR+
Sbjct: 184 FRVLDIAGCCLKVTTTEWLWDWIAYPCLTTLRLRRCTVRLCDLQKVILAAPRLAELRLES 243
Query: 221 VTALD 235
VT D
Sbjct: 244 VTFSD 248
>11_06_0511 - 24434007-24436814
Length = 935
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 29 PVFKSKIFRVIIIKYLKVKTTSWMLIGVVFRCLDSIEMSALS-VRAPGLQATTTVLDTRS 205
P+FKSK +V+ + K++ S +L+ L+S+ + +S + QA + + R+
Sbjct: 813 PIFKSKQIKVLELSLCKLRDDSLVLLSTNLCNLESLRLHNISGISKLVFQAINSFANLRT 872
Query: 206 LRVRGVTALD 235
L + + +D
Sbjct: 873 LLLHEIDGVD 882
>12_02_0796 +
23224357-23224427,23225714-23225810,23226335-23227146,
23227593-23227619,23227620-23229624
Length = 1003
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 422 LPELQTLVLIATRISECPVKVVHLQN 345
L LQTL L++T++ + P +V LQN
Sbjct: 683 LQHLQTLDLVSTKLRKSPKSIVRLQN 708
>11_06_0132 - 20431122-20431477,20431739-20433758
Length = 791
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 383 ISECPVKVVHLQNRSPIFDCPIPIVSPILSQRIFYSLLYRYSRINS 246
+ C + H + + + + +V+ +L +FY LL RY +I S
Sbjct: 416 LPRCTSQAPHRRQKFLVIPIVVSLVATLLLLLLFYKLLARYKKIKS 461
>10_08_0345 - 16985194-16985260,16985407-16985610,16987780-16988093
Length = 194
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 239 VRRNLFGCTDREENRRFVERELARQLELDSQRWGFDFANEQPLPGIQRFAW 391
VR N+ + E E + RQ +D ++ FD N+ PLPG RF W
Sbjct: 144 VRHNIIPASAELEAFFAAEEQRQRQAFID--KYNFDPVNDCPLPG--RFEW 190
>08_01_1084 -
11120719-11120950,11121035-11121133,11122446-11122849,
11123559-11124197
Length = 457
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 404 ASAVPVALRRSPITTSMPKQNTSTQEAKVSSPESTKT 514
A+ +PV LRRS T +P +TST + +SP + ++
Sbjct: 59 ATPIPVVLRRSLRTRGLP-PSTSTSSSSAASPPAPES 94
>06_03_0399 - 20403488-20405092
Length = 534
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 303 WRDNWNWTVKDGASIL 350
W W+W +KDGA +L
Sbjct: 384 WETTWSWLLKDGAGLL 399
>05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,
8165938-8166012,8166674-8166846,8168697-8168795,
8169002-8169161,8169321-8169464,8169551-8169723,
8169796-8169991,8170061-8170258,8170864-8171016,
8171838-8171959,8172037-8172136,8172221-8172316,
8172400-8172530,8173717-8173819,8174373-8174555,
8174632-8174724,8174818-8174853,8175672-8175773,
8176310-8176472,8176557-8176678,8176994-8177158,
8177667-8177849,8178679-8178831,8179136-8179288,
8179373-8179444,8179530-8179664,8179739-8179800,
8179999-8180096,8180628-8180737,8180832-8181005,
8181092-8181157,8181847-8181915,8181989-8182099,
8182418-8182558,8182638-8182766,8182864-8183029,
8183174-8183388,8184883-8185089,8185501-8185572,
8185897-8186010,8186090-8186281,8186489-8186569,
8186654-8186728,8186812-8186878,8187292-8187452,
8187943-8188116,8188209-8188337,8188421-8188504,
8188589-8188650,8188728-8188800,8189008-8189142,
8189790-8189960,8190054-8190319,8190440-8190458
Length = 2448
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 228 LSMVSEGI-YSAVPIEKRIEDSLRENWRDNWNWTVK 332
LS + E I Y +P+E I DS RE R+ WN +K
Sbjct: 1496 LSELEEVIDYCTLPMESPIADSRRELIRNMWNERIK 1531
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 564 FPDSLFRGFK-KSVILFWVLVLSGLETLASW 475
FPD FRGFK K + WV+ + L + W
Sbjct: 28 FPDDPFRGFKGKPLTTKWVMAVQYLFPILDW 58
>04_03_0316 + 14261942-14262506,14262710-14263134
Length = 329
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 194 DTRSLRVRGVTALDGVRRNLFGCTDREENRRFVERELARQLELDSQRW 337
DTR R RG+ RR + GC+ R + + L+ D RW
Sbjct: 128 DTRRARPRGLHVRVRRRRGIIGCSAWPGIRLWAREQRGLHLKRDRHRW 175
>01_05_0714 +
24555494-24555637,24555884-24556071,24556195-24556280,
24556359-24556461,24556798-24557000,24557077-24557681,
24557784-24557918,24558040-24558067,24559517-24559596,
24559873-24559975,24560553-24560635,24560915-24561017,
24561596-24561720,24562001-24562103,24562647-24562726,
24563322-24563429,24563521-24563565
Length = 773
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = +2
Query: 443 TTSMPKQNTSTQ-EAKVSSPESTKTQKRITDFLKPRK--RLSGNGKKSPAHSHKHECGHG 613
T +P ++T Q ++++ + K I + L P K GN KK P+ K G
Sbjct: 640 TPEIPPEDTYPQNQSEIHRGNTEKLAVDINNALSPSKGKEQRGNNKKQPSKRQKRAAGEA 699
Query: 614 AHI--RPPKVARLSQPHFKRT 670
+ P QPH + T
Sbjct: 700 GDLETHAPNFEPEIQPHVQDT 720
>01_03_0212 + 13842142-13842634,13842727-13843319
Length = 361
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 643 TSHFGRTNVSPMTTLVLVAVRGGLLPVPR*PFPGLQEIC 527
T FG + T L LVA RGG+ + P+ G+Q C
Sbjct: 200 TGSFGCSGGHSDTALNLVASRGGITSEEKYPYTGVQGSC 238
>01_03_0209 - 13820980-13821572,13821665-13822157
Length = 361
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 643 TSHFGRTNVSPMTTLVLVAVRGGLLPVPR*PFPGLQEIC 527
T FG + T L LVA RGG+ + P+ G+Q C
Sbjct: 200 TGSFGCSGGHSDTALNLVASRGGITSEEKYPYTGVQGSC 238
>12_02_0451 -
19179592-19179648,19179745-19179879,19180214-19180247,
19180347-19180423,19180523-19180598,19180792-19180925,
19181772-19181878,19182505-19182808,19182913-19183218
Length = 409
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 380 SECPVKVVHLQNRSPIFDCPIPIVSPILSQRIF 282
S CP+ + + R F+C + SP L Q +F
Sbjct: 376 SNCPLNAIREKYRQQKFECVANLTSPELGQSLF 408
>08_02_1237 +
25475219-25475916,25476127-25476320,25476407-25477302,
25477416-25477490,25477582-25477689,25477780-25477897,
25478007-25478142,25478228-25478372,25478460-25479080,
25479166-25479597
Length = 1140
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 320 LDSQRWGFDFANEQPLPGIQRFAWQLVPASAVPVALRRSPITTSMPKQNTSTQEAKVSSP 499
LD Q GFD + G + Q VP++ +A+ + + TS P NTS + S
Sbjct: 368 LDKQTNGFD----KQADGFDK---QAVPSTMDLLAVLSTALATSNPDSNTSQSQGSSDSS 420
Query: 500 ESTKTQKRITD 532
+ K++ + T+
Sbjct: 421 GNNKSKSQSTE 431
>04_04_0068 + 22505675-22505930,22506307-22506404
Length = 117
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -3
Query: 704 GSGVGGAGRPSSCV*NAAAIDEP-LWEDE 621
G+G GG G SS + A ++D P +W DE
Sbjct: 35 GNGGGGGGDSSSAMVGAVSVDLPTMWGDE 63
>04_03_0197 - 12547382-12547450,12547955-12548231,12549031-12549137
Length = 150
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 704 GSGVGGAGRPSSCV*NAAAIDEP 636
G G+GGA SSC N AA ++P
Sbjct: 24 GEGIGGAQASSSCPLNLAANEDP 46
>03_06_0154 + 32029133-32029765
Length = 210
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 419 VALRRSPITTSMPKQNTSTQEAKVSSPESTKTQKRITDFLKPRKRLSGNGKKSPAHSH-- 592
VA R + +P+ T + +P TQ+++++ R+R G G AH+
Sbjct: 112 VAALRVHVNQRVPRDETQSNLPFRDAPVRLPTQRKVSNLRARRERDGGGGDDVDAHATII 171
Query: 593 KH-ECGHGAHIRPPKVARLSQPHFKRTS 673
+H E H + ++ P +A L + TS
Sbjct: 172 RHGEEKHHSLVKNPCLAWLVTMAVQETS 199
>02_05_0442 - 29044736-29046604
Length = 622
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 350 ANEQPLPGIQRFAWQLVPASAVPVALRRSPI--TTSMPKQNTSTQEAKVSSPESTKT 514
A + P G ++ A P++A + SP+ TT PKQ E V+ ++T+T
Sbjct: 16 APQSPSYGRKKNASAAPPSAAASTTVLTSPLVTTTRTPKQTEQEDEQLVAKTKTTRT 72
>01_01_0459 +
3400288-3400729,3400760-3400806,3401055-3401141,
3401230-3401561,3401648-3401807,3402155-3402223,
3403165-3403263
Length = 411
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 542 PRKRLSGNGKKSPAHSHKHECGHGAH 619
PR R+ G G + AH H+HE G AH
Sbjct: 107 PRARVLGGGMYA-AHRHRHERGAHAH 131
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +3
Query: 366 YRAFRDSRGN*YQRLQFR*R*EGHRSQPRCRNRIHPPRRLKFQVQRAPRPKRE*QIS*SP 545
YR RD G +R R R S R R+R PR K + PKR + S SP
Sbjct: 573 YRDDRDKYGRSGRRESDRSRDHYSSSSRRNRSRSISPRHKKSSRSDSRSPKRHREESLSP 632
Query: 546 GKGYRGT---GRSP 578
K R RSP
Sbjct: 633 SKSRRSARAGSRSP 646
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,629,423
Number of Sequences: 37544
Number of extensions: 477727
Number of successful extensions: 1564
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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