Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h17
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   3.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   3.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.7  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 548 SGVLCSYYTPIFDTYPISLQPYF 480
           +G LC+ Y P+    P+ L P F
Sbjct: 167 AGFLCNNYLPLPQVPPLPLPPIF 189


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 548 SGVLCSYYTPIFDTYPISLQPYF 480
           +G LC+ Y P+    P+ L P F
Sbjct: 167 TGFLCNNYPPLPQVPPLPLPPIF 189


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 503  DKYQKLGCNMSIKLHFLDSHVDFFPDN 583
            DKY +L  N S +  F+   VDF   N
Sbjct: 1909 DKYSRLVNNPSARRRFIAHVVDFIETN 1935


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 195 LIIFFCLTFFVSTLRFLRGFHYF 127
           L+   C+ +FV  L FL   +YF
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYF 149



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 195 LIIFFCLTFFVSTLRFLRGFHYF 127
           L+   CL +F   L FL   +YF
Sbjct: 193 LLFLLCLDYFTLHLLFLPCIYYF 215


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 608 PALYCNHQDYQEKSPHVNLESGVLCSYY 525
           P    N+Q  Q  S + N + G  C YY
Sbjct: 209 PQFNFNYQYNQAYSNYNNYQEGFSCQYY 236


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 608 PALYCNHQDYQEKSPHVNLESGVLCSYY 525
           P    N+Q  Q  S + N + G  C YY
Sbjct: 229 PQFNFNYQYNQAYSNYNNYQEGFSCQYY 256


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 581 NLGDYSKEQEERFYQDIKTMETR 649
           N  DY K+ E RFY+  + +  R
Sbjct: 551 NPSDYVKQTERRFYRHRERLVAR 573


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 243 IIPSLI*SGGSKNFSGLIIFFCLTFFVSTLRFLRG 139
           +IP L+  G   N S + I+F    F+S  R+  G
Sbjct: 565 VIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYGNG 599


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 243 IIPSLI*SGGSKNFSGLIIFFCLTFFVSTLRFLRG 139
           +IP L+  G   N S + I+F    F+S  R+  G
Sbjct: 565 VIPFLLFGGFFLNVSSIPIYFKWLSFLSWFRYGNG 599


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 602 LYCNHQDYQEKSPHVNLESGV 540
           +Y +HQ   + +P +N E+G+
Sbjct: 63  VYYHHQTIPQDNPIINTETGL 83


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +2

Query: 464 KHPDYKNKVANLLDKYQK 517
           +H +  NK+ NL+D++ +
Sbjct: 211 EHQNLHNKICNLIDEFNE 228


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 602 LYCNHQDYQEKSPHVNLESGV 540
           +Y +HQ   + +P +N E+G+
Sbjct: 63  VYYHHQTIPQDNPIINTETGL 83


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 602 LYCNHQDYQEKSPHVNLESGV 540
           +Y +HQ   + +P +N E+G+
Sbjct: 63  VYYHHQTIPQDNPIINTETGL 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,972
Number of Sequences: 336
Number of extensions: 3503
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)