Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h17
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10129-1|CAA71216.1| 1274|Homo sapiens myosin binding protein C ...    30   7.2  
X84075-1|CAA58882.1| 1274|Homo sapiens cardiac myosin-binding pr...    30   7.2  
U91629-1|AAC04620.1| 1274|Homo sapiens cardiac myosin binding pr...    30   7.2  
EF560722-1|ABQ59032.1| 1274|Homo sapiens MYBPC3 protein protein.       30   7.2  
BC151211-1|AAI51212.1| 1274|Homo sapiens myosin binding protein ...    30   7.2  
BC142685-1|AAI42686.1| 1274|Homo sapiens myosin binding protein ...    30   7.2  
AY518390-1|AAR89909.1| 1273|Homo sapiens myosin binding protein ...    30   7.2  
AF430677-1|AAL26614.1|  126|Homo sapiens T cell receptor beta va...    30   7.2  
U58515-1|AAB04534.1|  424|Homo sapiens chitinase protein.              30   9.5  
U58514-1|AAB04533.1|  390|Homo sapiens chitinase precursor protein.    30   9.5  
U49835-1|AAC50597.1|  385|Homo sapiens YKL-39 precursor protein.       30   9.5  
BT006767-1|AAP35413.1|  390|Homo sapiens chitinase 3-like 2 prot...    30   9.5  
BC011460-1|AAH11460.1|  390|Homo sapiens chitinase 3-like 2 prot...    30   9.5  
AL513202-1|CAH70799.1|  390|Homo sapiens chitinase 3-like 2 prot...    30   9.5  
AK223316-1|BAD97036.1|  378|Homo sapiens chitinase 3-like 2 vari...    30   9.5  

>Y10129-1|CAA71216.1| 1274|Homo sapiens myosin binding protein C
           gene protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 CNMSIKLHFLDSHVDFFP 577
           CN+S KLHF++  +DF P
Sbjct: 623 CNLSAKLHFMEVKIDFVP 640


>X84075-1|CAA58882.1| 1274|Homo sapiens cardiac myosin-binding
           protein C  protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 CNMSIKLHFLDSHVDFFP 577
           CN+S KLHF++  +DF P
Sbjct: 623 CNLSAKLHFMEVKIDFVP 640


>U91629-1|AAC04620.1| 1274|Homo sapiens cardiac myosin binding
           protein-C protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 CNMSIKLHFLDSHVDFFP 577
           CN+S KLHF++  +DF P
Sbjct: 623 CNLSAKLHFMEVKIDFVP 640


>EF560722-1|ABQ59032.1| 1274|Homo sapiens MYBPC3 protein protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 CNMSIKLHFLDSHVDFFP 577
           CN+S KLHF++  +DF P
Sbjct: 623 CNLSAKLHFMEVKIDFVP 640


>BC151211-1|AAI51212.1| 1274|Homo sapiens myosin binding protein C,
           cardiac protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 CNMSIKLHFLDSHVDFFP 577
           CN+S KLHF++  +DF P
Sbjct: 623 CNLSAKLHFMEVKIDFVP 640


>BC142685-1|AAI42686.1| 1274|Homo sapiens myosin binding protein C,
           cardiac protein.
          Length = 1274

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 CNMSIKLHFLDSHVDFFP 577
           CN+S KLHF++  +DF P
Sbjct: 623 CNLSAKLHFMEVKIDFVP 640


>AY518390-1|AAR89909.1| 1273|Homo sapiens myosin binding protein C,
           cardiac protein.
          Length = 1273

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 524 CNMSIKLHFLDSHVDFFP 577
           CN+S KLHF++  +DF P
Sbjct: 622 CNLSAKLHFMEVKIDFVP 639


>AF430677-1|AAL26614.1|  126|Homo sapiens T cell receptor beta
           variable region protein.
          Length = 126

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -2

Query: 465 LLFPRKLLTTSLNASQASDSVLFIVASKFSSAIKDLICGPSNTPLIFASDNLGIF 301
           L FP      ++NA +  DS L++ AS F  A +    GP  T L+   D   +F
Sbjct: 56  LQFPNYSSELNVNALELDDSALYLCASSFQGARETQYFGP-GTRLLVLEDLKNVF 109


>U58515-1|AAB04534.1|  424|Homo sapiens chitinase protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YQDIKTMETRYQCRWNVNMMADYCWSLTND 709
           Y D+K+MET+ Q   N+N+     WS+  D
Sbjct: 370 YDDVKSMETKVQFLKNLNLGGAMIWSIDMD 399


>U58514-1|AAB04533.1|  390|Homo sapiens chitinase precursor protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YQDIKTMETRYQCRWNVNMMADYCWSLTND 709
           Y D+K+MET+ Q   N+N+     WS+  D
Sbjct: 336 YDDVKSMETKVQFLKNLNLGGAMIWSIDMD 365


>U49835-1|AAC50597.1|  385|Homo sapiens YKL-39 precursor protein.
          Length = 385

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YQDIKTMETRYQCRWNVNMMADYCWSLTND 709
           Y D+K+MET+ Q   N+N+     WS+  D
Sbjct: 331 YDDVKSMETKVQFLKNLNLGGAMIWSIDMD 360


>BT006767-1|AAP35413.1|  390|Homo sapiens chitinase 3-like 2
           protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YQDIKTMETRYQCRWNVNMMADYCWSLTND 709
           Y D+K+MET+ Q   N+N+     WS+  D
Sbjct: 336 YDDVKSMETKVQFLKNLNLGGAMIWSIDMD 365


>BC011460-1|AAH11460.1|  390|Homo sapiens chitinase 3-like 2
           protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YQDIKTMETRYQCRWNVNMMADYCWSLTND 709
           Y D+K+MET+ Q   N+N+     WS+  D
Sbjct: 336 YDDVKSMETKVQFLKNLNLGGAMIWSIDMD 365


>AL513202-1|CAH70799.1|  390|Homo sapiens chitinase 3-like 2
           protein.
          Length = 390

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YQDIKTMETRYQCRWNVNMMADYCWSLTND 709
           Y D+K+MET+ Q   N+N+     WS+  D
Sbjct: 336 YDDVKSMETKVQFLKNLNLGGAMIWSIDMD 365


>AK223316-1|BAD97036.1|  378|Homo sapiens chitinase 3-like 2 variant
           protein.
          Length = 378

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 620 YQDIKTMETRYQCRWNVNMMADYCWSLTND 709
           Y D+K+MET+ Q   N+N+     WS+  D
Sbjct: 324 YDDVKSMETKVQFLKNLNLGGAMIWSIDMD 353


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,579,151
Number of Sequences: 237096
Number of extensions: 1732364
Number of successful extensions: 3562
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3562
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)