Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h17
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023363-1|AAY55779.1|  319|Drosophila melanogaster IP10508p pro...    31   2.1  
AE014134-1202|AAF52467.2|  323|Drosophila melanogaster CG10399-P...    31   2.1  
AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p pro...    29   4.8  
AY060651-1|AAL28199.1|  518|Drosophila melanogaster GH07959p pro...    29   4.8  
AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl pyr...    29   4.8  
AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p pro...    29   4.8  
AE014134-1372|AAF52585.1|  518|Drosophila melanogaster CG7227-PA...    29   4.8  
AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-P...    29   4.8  

>BT023363-1|AAY55779.1|  319|Drosophila melanogaster IP10508p
           protein.
          Length = 319

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 263 LDKNNASFEYLCKKIPRLSDAKINGVFDGPQIR 361
           LDK      Y+C ++ R S++K+N  + GPQ R
Sbjct: 285 LDKLIQVGRYICTELGRTSESKVNRAWKGPQAR 317


>AE014134-1202|AAF52467.2|  323|Drosophila melanogaster CG10399-PA
           protein.
          Length = 323

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 263 LDKNNASFEYLCKKIPRLSDAKINGVFDGPQIR 361
           LDK      Y+C ++ R S++K+N  + GPQ R
Sbjct: 289 LDKLIQVGRYICTELGRTSESKVNRAWKGPQAR 321


>AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p
           protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +3

Query: 375 TKTLMPQ*ITLNQMLGWRSEMLSTIF---*EIINIPTIKIRLQTYWISIKNWGV 527
           T+ L P+ I L Q LGW  EML + F    ++++  T + R Q  W  ++N G+
Sbjct: 143 TQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTR-RGQPCWHKVENVGL 195


>AY060651-1|AAL28199.1|  518|Drosophila melanogaster GH07959p
           protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 599 YCNHQDYQEKSPHVNLESGVLCSYYTPIFDTYPISLQPYFYSRDVYY 459
           YC     + +S  +N+ S   C Y TP+F +Y     P+F+  D YY
Sbjct: 322 YCQDNCQEVRSGLLNISS---CWYGTPVFASY-----PHFFKADPYY 360


>AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl
           pyrophosphate synthase protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +3

Query: 375 TKTLMPQ*ITLNQMLGWRSEMLSTIF---*EIINIPTIKIRLQTYWISIKNWGV 527
           T+ L P+ I L Q LGW  EML + F    ++++  T + R Q  W  ++N G+
Sbjct: 104 TQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTR-RGQPCWHKVENVGL 156


>AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p
           protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +3

Query: 375 TKTLMPQ*ITLNQMLGWRSEMLSTIF---*EIINIPTIKIRLQTYWISIKNWGV 527
           T+ L P+ I L Q LGW  EML + F    ++++  T + R Q  W  ++N G+
Sbjct: 143 TQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTR-RGQPCWHKVENVGL 195


>AE014134-1372|AAF52585.1|  518|Drosophila melanogaster CG7227-PA
           protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 599 YCNHQDYQEKSPHVNLESGVLCSYYTPIFDTYPISLQPYFYSRDVYY 459
           YC     + +S  +N+ S   C Y TP+F +Y     P+F+  D YY
Sbjct: 322 YCQDNCQEVRSGLLNISS---CWYGTPVFASY-----PHFFKADPYY 360


>AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-PA
           protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = +3

Query: 375 TKTLMPQ*ITLNQMLGWRSEMLSTIF---*EIINIPTIKIRLQTYWISIKNWGV 527
           T+ L P+ I L Q LGW  EML + F    ++++  T + R Q  W  ++N G+
Sbjct: 143 TQDLTPENIKLAQYLGWCVEMLQSFFIISDDVMDNSTTR-RGQPCWHKVENVGL 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,653,572
Number of Sequences: 53049
Number of extensions: 558613
Number of successful extensions: 1471
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)