Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h17
         (718 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g17340.1 68414.m02113 phosphoinositide phosphatase family pro...    30   1.3  
At3g61100.1 68416.m06838 expressed protein contains Pfam profile...    30   1.8  
At5g47920.1 68418.m05919 expressed protein similar to unknown pr...    29   3.1  
At1g51380.1 68414.m05780 eukaryotic translation initiation facto...    29   3.1  
At1g34670.1 68414.m04311 myb family transcription factor similar...    29   3.1  
At5g50840.2 68418.m06299 expressed protein                             29   4.1  
At5g50840.1 68418.m06298 expressed protein                             29   4.1  
At3g52480.1 68416.m05771 expressed protein                             29   4.1  
At5g17910.1 68418.m02100 expressed protein                             27   9.4  
At4g28090.1 68417.m04030 multi-copper oxidase type I family prot...    27   9.4  
At1g31010.1 68414.m03797 expressed protein contains Pfam PF05329...    27   9.4  

>At1g17340.1 68414.m02113 phosphoinositide phosphatase family
           protein contains similarity to phosphoinositide
           phosphatase SAC1 [Rattus norvegicus]
           gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
           SacI homology domain; identical to cDNA SAC domain
           protein 5 (SAC5)  GI:31415726
          Length = 785

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 473 DYKNKVA-NLLDKYQKLGCNMSIKLHFLDSHVDFFPDNLGDYSKEQEERFYQDIKTMETR 649
           D  N +A  L+D YQK+G  ++++    ++H   F D  G+++    +R   DI T   R
Sbjct: 507 DLNNPLAIELMDAYQKMGNTLAMQYGGSEAHSKMFCDLRGNWNMVMRQR---DIFTAVRR 563

Query: 650 Y 652
           Y
Sbjct: 564 Y 564


>At3g61100.1 68416.m06838 expressed protein contains Pfam profile
           PF04396: Protein of unknown function, DUF537
          Length = 166

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 395 MNNTESDAWLAFRDVVNNFLGNNKHP-DYKNKVANLLDKYQKLGCNMSIKLHFLDSH 562
           M   E D  + F DVV   L ++  P +    + + LD+   L CN+SI+++   +H
Sbjct: 1   MTTEEEDKVVVFWDVVECPLPDDLEPSEVSENIESALDRQGYLPCNVSIRVYGKKNH 57


>At5g47920.1 68418.m05919 expressed protein similar to unknown
           protein (emb|CAB67623.1)
          Length = 187

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 461 NKHPDYKNKVANL-LDKYQKLGC-NMSIKLHFLDSHVDFFPDNLGDYSKEQ 607
           NK   +K +V  L L K++KLG  ++S K+H L  H D   DN  D  K +
Sbjct: 28  NKTSAFKTRVLMLSLVKHKKLGFRSISNKIHHLLGHADQDDDNDQDQDKNK 78


>At1g51380.1 68414.m05780 eukaryotic translation initiation factor
           4A, putative / eIF-4A, putative
          Length = 392

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +2

Query: 152 LKVETKNVKQKKIISPEKFLLPPLHIKLGMMKQFVKALDKNNASFEYLCKKIPRLS 319
           L  E   + +K +  P + L+ P  + L  +KQ+   +DK    F+ LC    RL+
Sbjct: 205 LPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLT 260


>At1g34670.1 68414.m04311 myb family transcription factor similar to
           myb-related protein mixta GI:485867 from [Antirrhinum
           majus]
          Length = 365

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 587 QDYQEKSPHVNLESGVLCSYYTPIFDTYPISLQPYFYSRDVYYFLENC*QH 435
           Q  Q++  H+N     L S   P+ D  P SLQ    S D  +F++N  +H
Sbjct: 247 QPLQQQKYHLNNSPSELPSQGDPLLDHVPFSLQTPLNSED--HFIDNLVKH 295


>At5g50840.2 68418.m06299 expressed protein
          Length = 405

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = +2

Query: 98  SIARDKHYVQK*WNPRKNLKVETKNVKQKKIISPEKFLLPPLHIKLGMMKQFVKALDKNN 277
           S  + K + +K  + +  +KV    V Q  ++S EK L   L       +QF  AL K+N
Sbjct: 261 SALKIKQHEEKLIHEQSQMKVYADQVSQ--LLSTEKNLRLQLTSDGDKFQQFQDALVKSN 318

Query: 278 ASFEYLCKKIPRLSDA 325
             FE   ++I ++S A
Sbjct: 319 EVFETFKQEIDKMSKA 334


>At5g50840.1 68418.m06298 expressed protein
          Length = 404

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = +2

Query: 98  SIARDKHYVQK*WNPRKNLKVETKNVKQKKIISPEKFLLPPLHIKLGMMKQFVKALDKNN 277
           S  + K + +K  + +  +KV    V Q  ++S EK L   L       +QF  AL K+N
Sbjct: 260 SALKIKQHEEKLIHEQSQMKVYADQVSQ--LLSTEKNLRLQLTSDGDKFQQFQDALVKSN 317

Query: 278 ASFEYLCKKIPRLSDA 325
             FE   ++I ++S A
Sbjct: 318 EVFETFKQEIDKMSKA 333


>At3g52480.1 68416.m05771 expressed protein
          Length = 209

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -2

Query: 393 VASKFSSAIKDLICGPSNTPLIFASDNLGIFLHRYSKL 280
           VASK+S   ++L+CGPS T    A D      HR  ++
Sbjct: 98  VASKWSINGENLLCGPSETLFTIAEDYTSESDHRTGEI 135


>At5g17910.1 68418.m02100 expressed protein
          Length = 1342

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/72 (18%), Positives = 36/72 (50%)
 Frame = +2

Query: 254 VKALDKNNASFEYLCKKIPRLSDAKINGVFDGPQIRSLMADENFDATMNNTESDAWLAFR 433
           ++ L     S+    +++  +S++K++ + D   + +++ D+      NN + +  +A  
Sbjct: 509 LERLANEGTSYYPFERQLSEVSESKVSSIPDTESVCTVLEDDEKKVDENNADRETKIAKV 568

Query: 434 DVVNNFLGNNKH 469
           D+V++    N H
Sbjct: 569 DMVSDNDEENNH 580


>At4g28090.1 68417.m04030 multi-copper oxidase type I family protein
           similar to pollen-specific BP10 protein
           [SP|Q00624][Brassica napus]; contains Pfam profile:
           PF00394 Multicopper oxidase
          Length = 547

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 329 INGVFDGPQIRSLMADENFDATMNNTESDAWL 424
           ING F GP+IRSL  ++N    + N   D +L
Sbjct: 51  INGQFPGPEIRSL-TNDNLVINVQNDLDDPFL 81


>At1g31010.1 68414.m03797 expressed protein contains Pfam PF05329:
           Protein of unknown function (DUF731)
          Length = 360

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 419 WLAFRDVVNNFLGNNKHPDYKNK 487
           W  +R++  N   N KHPD+K K
Sbjct: 234 WCDYREMKQNGSVNPKHPDFKKK 256


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,683,934
Number of Sequences: 28952
Number of extensions: 276003
Number of successful extensions: 772
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)