Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h15
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.88 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.7  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    23   6.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 344  DGDEFDDDQRASSPDSDDNSAKGDEAEED 430
            DG+E DD+      D DD++  G+  E +
Sbjct: 1822 DGNEDDDEDDEDDDDDDDDTTTGEGNEHE 1850


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 467 VVRNPRFILNPARLTGPRGIQVIP 538
           ++R P F LNPA+L  P G   +P
Sbjct: 554 LLRAPFFPLNPAQLRFPAGFPNLP 577


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 302 QDEANEARELERVIDGDEFDDDQRASSPDSDD-NSAK--GDEAEEDTRRVD 445
           ++   E +E E   D +E D+ +   S +SD+   A+   +E EE  + +D
Sbjct: 77  EEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQELD 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,313
Number of Sequences: 2352
Number of extensions: 9769
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)