Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h14
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    28   0.063
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   5.5  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   7.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.3  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 0.063
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 399 LNLYHS-DFKYHTQHHQQWQVNEAIS 473
           +NL HS D   H QHHQQ   +E +S
Sbjct: 303 MNLLHSNDLNMHQQHHQQNMSHEELS 328


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -2

Query: 592 GLLNCVICKVQIKRSNYFKDCPQFFCRIISLNKASSNL 479
           G   CV CK +  +   +++C +  C  +   K SS L
Sbjct: 869 GEYKCVTCKCENGKPTCWRECDKATCEKLFRMKKSSAL 906


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 654 ISPEPKKQLHPASVSSNSKFTGCLTVSFARFKSNG 550
           ++P P    HP +V SN   +   + S+  +  NG
Sbjct: 117 LTPSPGPPSHPYTVISNGYSSPMSSGSYDPYSPNG 151


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 107 ECGFEKGTIKLDSIRNVF 160
           E  F++   +LDSIRN+F
Sbjct: 2   ELWFKQIIYELDSIRNIF 19


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 107 ECGFEKGTIKLDSIRNVF 160
           E  F++   +LDSIRN+F
Sbjct: 62  ELWFKQIIYELDSIRNIF 79


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 107 ECGFEKGTIKLDSIRNVF 160
           E  F++   +LDSIRN+F
Sbjct: 62  ELWFKQIIYELDSIRNIF 79


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 175 CNGKCKFYVRSTNYGSSFVC*GNW*SCCRVDR 270
           C+G   F+ RS      +VC       C +D+
Sbjct: 55  CDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDK 86


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +1

Query: 175 CNGKCKFYVRSTNYGSSFVC*GNW*SCCRVDR 270
           C+G   F+ RS      +VC       C +D+
Sbjct: 55  CDGCAGFFKRSIRRNRQYVCKAKDEGSCIIDK 86


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 151 KCVLFWSNCNGKCKFY 198
           KC +FW+  NG+   Y
Sbjct: 107 KCDVFWNCWNGEASRY 122


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 151 KCVLFWSNCNGKCKFY 198
           KC +FW+  NG+   Y
Sbjct: 107 KCDVFWNCWNGEASRY 122


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 353  QHLVANNGQIQLPAGPQSL 409
            Q+ + N GQ+QL   P  L
Sbjct: 2251 QYYLCNQGQLQLQVCPNGL 2269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,846
Number of Sequences: 336
Number of extensions: 3624
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)