Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h14
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0190 + 11628375-11628421,11628560-11628714,11628958-116290...    31   1.2  
10_08_0001 + 13984436-13984514,13984804-13984926,13985181-139854...    30   2.0  
05_06_0209 - 26389902-26389928,26389981-26390161,26390265-263904...    29   3.5  
11_06_0023 - 19325966-19326046,19326132-19326248,19326635-193267...    28   8.1  

>10_06_0190 +
           11628375-11628421,11628560-11628714,11628958-11629086,
           11629234-11629508
          Length = 201

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 524 LGTIFEVVAPFDLNLANDTVKQPVNFELEETDAG 625
           +GT++  +  F + LA+  VK   N+++E+ D G
Sbjct: 140 VGTVYSYMDSFKIALASHAVKHEYNYDIEKNDTG 173


>10_08_0001 +
           13984436-13984514,13984804-13984926,13985181-13985468,
           13985560-13985690,13985764-13985979,13986059-13986442
          Length = 406

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/72 (25%), Positives = 31/72 (43%)
 Frame = -2

Query: 337 RLVAIVSNLFVLFNTIICFSFFFDPLYNSFTSCLNKQSLNRNWSI*RKIYTSRYNLTRIK 158
           R   +++NLF +     CF  +  P +  F   +  +       + R +YTS Y +  I 
Sbjct: 260 RWTIVMANLFAVIQITGCFQIYCRPTFAQFEQRIQAKDAGYRARMWRLVYTSAY-MVVIT 318

Query: 157 HISY*VQLYGAF 122
            IS  +  +G F
Sbjct: 319 LISAAMPFFGDF 330


>05_06_0209 -
           26389902-26389928,26389981-26390161,26390265-26390407,
           26390480-26390588,26390839-26391023,26391428-26392082,
           26392392-26392496,26392757-26392844,26392885-26392947,
           26393451-26393513,26394328-26394484
          Length = 591

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/68 (26%), Positives = 33/68 (48%)
 Frame = +2

Query: 488 ARLIQANNSAEELGTIFEVVAPFDLNLANDTVKQPVNFELEETDAGCSCFFGSGEISVKI 667
           A+ ++A+ S + L T   + +   +N  ND +   VN +     +   CF   G ISV +
Sbjct: 327 AQCLRASTSLKALATPASLKST--VNFPNDDLSHQVNSDNGVIKSKRPCFLRIGSISVSM 384

Query: 668 TLPVTGYC 691
           ++  T +C
Sbjct: 385 SIHQTHFC 392


>11_06_0023 -
           19325966-19326046,19326132-19326248,19326635-19326703,
           19326922-19327119,19327388-19327591,19327688-19327828,
           19328416-19328625,19329330-19329944
          Length = 544

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 118 RKRHHKVGLNKKCVLFWSNCNGKCKFYVRSTNYGSSFVC*GNW 246
           R+R   +GL+ + VLF +N +   +F+  +  +G+      NW
Sbjct: 369 RRRFENMGLSMQDVLFLANDDNVARFFDSTLEHGADAKLAANW 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,805,596
Number of Sequences: 37544
Number of extensions: 322510
Number of successful extensions: 799
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)