Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11h14
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30) 36 0.024
SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26) 31 1.2
SB_21179| Best HMM Match : DUF156 (HMM E-Value=2.9) 29 3.6
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.6
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 29 4.8
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_16909| Best HMM Match : Peptidase_S8 (HMM E-Value=8.7) 28 8.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 28 8.3
SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8845| Best HMM Match : Ribosomal_L30_N (HMM E-Value=1.2) 28 8.3
>SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 56.4 bits (130), Expect = 2e-08
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 2/192 (1%)
Frame = +2
Query: 119 EKGTIKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGV 298
E I+LD V+ G V+G V FTL + I V+ +++ G VE +E T T+ G
Sbjct: 4 ENYAIELDRKDLVYTLGDYVSGEVRFTLTKEIRVREIYLHFFGRGKVEVMEGRT-TFIGK 62
Query: 299 KQYKQVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTA--PSTVAGERGNI 472
++Y Y + A L + + NG ++ G PF F++P P T + G I
Sbjct: 63 QEY-----YRHVAELLDKEKVAGMNGILK--PGEYKYPFSFELPFDGDLPGTYEAKHGYI 115
Query: 473 NYKITARLIQANNSAEELGTIFEVVAPFDLNLANDTVKQPVNFELEETDAGCSCFFGSGE 652
Y + A + + + + GT+ V+ D + T+ +P + E G +C SG
Sbjct: 116 KYSLEALIDRPLMTPAKTGTLITVI---DYVEIDKTLLEP-RQKQENWHVGYNC-CASGS 170
Query: 653 ISVKITLPVTGY 688
++V + G+
Sbjct: 171 LTVTAKIDRAGF 182
>SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Frame = +2
Query: 131 IKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYN-GVKQY 307
I L + VFY G+++ GSV L++ + + + +E GEA V W E N + Y
Sbjct: 9 ITLTGEKRVFYPGEVLNGSVYLKLNKELKTRGIRLEFHGEANVRWSESSGSGNNRRTRTY 68
Query: 308 KQVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIP-HTAPSTVAGERGNINYKI 484
+ Y N + + P G S PF F IP P++ G G++ Y +
Sbjct: 69 RNQEVYINTVATLYGKDPGQGGDNPVHPPGEYSYPFSFIIPQQNLPTSFEGNFGHVRYWL 128
Query: 485 TA 490
A
Sbjct: 129 KA 130
>SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30)
Length = 173
Score = 36.3 bits (80), Expect = 0.024
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Frame = +2
Query: 131 IKLDSIRNVFYSGQIVTGSVNFTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQYK 310
I L+ +++ G++V+G + +++ VE GEA W E E Y + +
Sbjct: 9 IVLNRKNRIYHPGEVVSGECVVYSKESLKFRSVHVEFHGEARTNW--DEMENYTTTHKNE 66
Query: 311 QVRYYGNEAYLRHTQH-----LVANNGQIQ------------LPAGPQSLPFRFQI-PHT 436
+V Y+ + L H L+ +G + L AG +L F F+I P +
Sbjct: 67 EV-YFNKKTSLLANVHLYRAVLIYLSGYVYDFAGDKKRAVSVLSAGRHALEFSFKIPPFS 125
Query: 437 APSTVAGERGNINYKITARL 496
PS+ G++ Y + AR+
Sbjct: 126 LPSSFESTHGHVRYYLRARI 145
>SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Frame = +2
Query: 386 LPAGPQSLPFRFQIP-HTAPSTVAGERGNINYKITARLIQANNSAEELGTIFEVVAPFDL 562
L AG +L F F+IP + PS+ G++ Y + AR+ + E V+ D+
Sbjct: 123 LSAGRHALEFSFKIPPFSLPSSFESTHGHVRYYLRARISRPWRFDEVTKLQVHVIDLIDV 182
Query: 563 NLANDTVKQPVNFELEETDAGCSCFFGSGEISVKITLPVTGYCP 694
N + + PV E ++ C C + + + + YCP
Sbjct: 183 N--SPRLLMPVFGEAQKA-LNCLCNGTAAPLHALVYTDRSAYCP 223
>SB_7282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 316 NLFVLFNTIICFSFFFDPLYNS-FTSCLNKQSL 221
NLF +F T +CF FDP + S FT ++++ L
Sbjct: 1651 NLFRIFKTYVCFQGEFDPSFGSEFTFTVHQKEL 1683
>SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26)
Length = 692
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 601 KVYGLLNCVICKVQIKRSNYFKDCPQFFCRIISLN 497
K G L+ + ++ +++S +FKDCP F II+L+
Sbjct: 507 KYGGALDLEMLRMTLRQSAFFKDCPPGFIYIIALS 541
>SB_21179| Best HMM Match : DUF156 (HMM E-Value=2.9)
Length = 212
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +2
Query: 281 ETYNGVKQYKQVRYYGNEAYLRHTQHLVANNGQIQLPAGPQSLPFRFQIPHTAPST 448
E GV++ K+ + H +H +A + P P+SL R ++ + P+T
Sbjct: 4 EEAKGVEETKKAATAAGASIAEHIKHAIAEQVKRAKPGFPRSLTLRQKLLYAVPAT 59
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 310 FVLFNTIICFSFFFDPL-YNSFTSCLNKQSLN 218
F + T+ICF+FFF + N FT +++ SLN
Sbjct: 751 FGTYATLICFAFFFYFIRTNLFTVAISRSSLN 782
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Frame = +2
Query: 206 RPITVQALFVEATGEAVVEW--IEKETETYNGVKQYKQVRYYGNEAYLRHTQHLVANNGQ 379
RP+ + LF G W + +E V+ K+ + H +H +A +
Sbjct: 428 RPLEEERLFAFGLGMDWEGWRMLNEEAIPRREVEDTKKAATAAGASIAEHIEHAIAEQVK 487
Query: 380 IQLPAGPQSLPFRFQIPHTAPSTVAGERGN 469
P P+SL ++ + P+T G+
Sbjct: 488 RAKPGFPRSLTLGQKLLYAVPATTVESTGS 517
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +2
Query: 128 TIKLDSIRNVFYSGQIVTGSVN-FTLDRPITVQALFVEATGEAVVEWIEKETETYNGVKQ 304
+I R +F+ TG N F L R V + A G + + I K+T T +Q
Sbjct: 336 SIHTHCFRMLFHDLLETTGLYNEFILYRLTEVTEFDLIACGPVMADDIAKKTPTPKKPRQ 395
Query: 305 YKQVRYYGNEAYLRHTQHLVANN 373
K+ RYY ++ + +NN
Sbjct: 396 PKRKRYYRRTRHVNRPRGKPSNN 418
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = +2
Query: 206 RPITVQALFVEATGEAVVEW-----IEKETETYNGVKQYKQVRYYGNEAYLRHTQHLVAN 370
RP+ + LF ++W + +E + V++ K+ + H +H +A
Sbjct: 192 RPLEEERLFAFGEHRLSMDWEGWRMLNEEATSRREVEETKKAATAAGASIAEHIKHAIAE 251
Query: 371 NGQIQLPAGPQSLPFRFQIPHTAPST 448
+ P P+SL ++ + P+T
Sbjct: 252 QVKRAKPGFPRSLTLAQKLLYAVPAT 277
>SB_16909| Best HMM Match : Peptidase_S8 (HMM E-Value=8.7)
Length = 301
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 214 NWSI*RKIYTSRYNLTRIKHISY*VQLYGAFFETTFHYF 98
NW+ YT +Y R K + Y + +Y +T +YF
Sbjct: 137 NWAAAMLDYTKKYYNNRTKSLDYSISVYAKAKDTLKYYF 175
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 404 SLPFRFQIPHTAPSTVAGERGNINYKITARLIQANNSAEELGTIFEVVAP-FDLNLANDT 580
S P +IP+ S + GE N YK+ I + + GT + F +LA +
Sbjct: 901 SFPITIEIPNKGFSLIPGEFANFEYKLKITSISPQSGSMAGGTELTINGEGFSADLAGNV 960
Query: 581 V 583
V
Sbjct: 961 V 961
>SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +2
Query: 206 RPITVQALFVEATGEAVVEW--IEKETETYNGVKQYKQVRYYGNEAYLRHTQHLVANNGQ 379
RP+ + LF W + +E V++ K+V + H +H +A +
Sbjct: 381 RPLEEERLFAFGLSMDWEGWRMLNEEAIPRREVEETKKVATVAGASIAEHIEHAIAEQVK 440
Query: 380 IQLPAGPQSLPFRFQIPHTAPST 448
P P+SL ++ + P+T
Sbjct: 441 RAKPGFPRSLTLAQKLLYAVPAT 463
>SB_8845| Best HMM Match : Ribosomal_L30_N (HMM E-Value=1.2)
Length = 490
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/81 (22%), Positives = 31/81 (38%)
Frame = +2
Query: 206 RPITVQALFVEATGEAVVEWIEKETETYNGVKQYKQVRYYGNEAYLRHTQHLVANNGQIQ 385
RP+ V+ LF W E G ++ K + H +H +A +
Sbjct: 346 RPLEVERLFAFGLSMDWEGW-RMLNEEAKGAEETKMAATAAGASIAEHIKHAIAEQVKHA 404
Query: 386 LPAGPQSLPFRFQIPHTAPST 448
P P+SL ++ + P+T
Sbjct: 405 KPGFPRSLTLGQKLLYAVPAT 425
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,120,014
Number of Sequences: 59808
Number of extensions: 398929
Number of successful extensions: 1157
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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