Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h14
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   6.4  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   8.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   8.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 639 KKQLHPASVSSNSKFTGC 586
           KKQ   A  SS +K+TGC
Sbjct: 782 KKQGSSAGTSSITKYTGC 799



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 670 CYLNTYFS*TKKTAASCV 617
           CYLNT+      T  +C+
Sbjct: 564 CYLNTFLLLATPTTVTCI 581


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 639 KKQLHPASVSSNSKFTGC 586
           KKQ   A  SS +K+TGC
Sbjct: 872 KKQGSSAGTSSITKYTGC 889



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 670 CYLNTYFS*TKKTAASCV 617
           CYLNT+      T  +C+
Sbjct: 654 CYLNTFLLLATPTTVTCI 671


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/52 (25%), Positives = 19/52 (36%)
 Frame = +2

Query: 479 KITARLIQANNSAEELGTIFEVVAPFDLNLANDTVKQPVNFELEETDAGCSC 634
           K    L    N+ E+  T   V  PF+    N    +P+  +  E    C C
Sbjct: 530 KFPITLQPGKNTIEQKSTKSSVTIPFERTFRNLDENRPIGGDSLERFDFCGC 581


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 521 ELGTIFEVVAPFDLNLANDTVKQPV-NFE 604
           E+G  F+      +N++ D V QP+ +FE
Sbjct: 171 EIGINFDKYDNIQVNVSGDNVPQPIESFE 199


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 387 FQPVLNLYHSDFKYHTQH 440
           F P++  YH  FK   +H
Sbjct: 65  FDPIIEDYHGGFKKTDKH 82


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 387 FQPVLNLYHSDFKYHTQH 440
           F P++  YH  FK   +H
Sbjct: 81  FDPIIEDYHGGFKKTDKH 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,520
Number of Sequences: 438
Number of extensions: 4043
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)