Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11h12
(633 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 33 1.1
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 33 1.1
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 33 1.1
AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta) pr... 33 1.1
AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 33 1.1
AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein. 31 4.5
BC046159-1|AAH46159.1| 272|Homo sapiens Similar to PTPRF intera... 30 5.9
BC022873-1|AAH22873.1| 292|Homo sapiens Unknown (protein for IM... 30 5.9
AF034802-1|AAC26103.1| 1005|Homo sapiens liprin-beta1 protein. 30 5.9
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 30 7.8
BC130277-1|AAI30278.1| 1444|Homo sapiens phosphoinositide-3-kina... 30 7.8
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 30 7.8
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 30 7.8
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 30 7.8
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 30 7.8
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 30 7.8
AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein. 30 7.8
AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein. 30 7.8
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 30 7.8
AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein. 30 7.8
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 30 7.8
AJ000008-1|CAA03853.1| 1448|Homo sapiens PI3-kinase protein. 30 7.8
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 381 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D+ L ++ NN + LE + K+S + K E ++++LE ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 381 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D+ L ++ NN + LE + K+S + K E ++++LE ET+
Sbjct: 39 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 85
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 381 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D+ L ++ NN + LE + K+S + K E ++++LE ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238
>AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 322
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 381 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D+ L ++ NN + LE + K+S + K E ++++LE ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238
>AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 381 DISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D+ L ++ NN + LE + K+S + K E ++++LE ET+
Sbjct: 192 DLEEELKIVTNNLKSLEAQADKYSTKEDKYEEEIKLLEEKLKEAETR 238
>AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein.
Length = 1326
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 318 EYHCHTCNTKCDLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQE---LPKLEGQME 485
E H HT K LN +N +K ++ ++I L+K L +L+G +E
Sbjct: 572 ELHAHTKELKTSLNNAQLELNRWQARFDELKEQHQTMDISLTKLDNHCELLSRLKGNLE 630
>BC046159-1|AAH46159.1| 272|Homo sapiens Similar to PTPRF
interacting protein, binding protein 1 (liprin beta 1)
protein.
Length = 272
Score = 30.3 bits (65), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 351 DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D G+ + IND+ +S M + E KL EL L+ Q+E E+ ++ K
Sbjct: 192 DTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKDELASLKEQLEEKESEVKRLQEK 248
>BC022873-1|AAH22873.1| 292|Homo sapiens Unknown (protein for
IMAGE:4102924) protein.
Length = 292
Score = 30.3 bits (65), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 351 DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D G+ + IND+ +S M + E KL EL L+ Q+E E+ ++ K
Sbjct: 199 DTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKDELASLKEQLEEKESEVKRLQEK 255
>AF034802-1|AAC26103.1| 1005|Homo sapiens liprin-beta1 protein.
Length = 1005
Score = 30.3 bits (65), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 351 DLNGITRNINDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
D G+ + IND+ +S M + E KL EL L+ Q+E E+ ++ K
Sbjct: 199 DTEGLIQEINDLRLKVSEMDSERLQYEKKLKSTKDELASLKEQLEEKESEVKRLQEK 255
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 192 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 239
>BC130277-1|AAI30278.1| 1444|Homo sapiens phosphoinositide-3-kinase,
class 2, gamma polypeptide protein.
Length = 1444
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 396 LSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETKDFGWNPNSPLL 554
L L+ +++ D EI+ Q+L L E+LE L V+ F WN SPL+
Sbjct: 724 LGLLTSSFPDQEIRKVAV-QQLDNLLND-ELLEYLPQLVQAVKFEWNLESPLV 774
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 65 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 112
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 192 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 239
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 192 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 239
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 191 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 238
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 149 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 196
>AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein.
Length = 247
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 155 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 202
>AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 155 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 202
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 65 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 112
>AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 65 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 112
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 378 NDISRNLSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETK 521
+++ L + NN + LE + K+SQ+ K E +++IL ET+
Sbjct: 150 SELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETR 197
>AJ000008-1|CAA03853.1| 1448|Homo sapiens PI3-kinase protein.
Length = 1448
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 396 LSLMKNNYEDLEIKLSKFSQELPKLEGQMEILEALANTVETKDFGWNPNSPLL 554
L L+ +++ D EI+ Q+L L E+LE L V+ F WN SPL+
Sbjct: 725 LGLLTSSFPDQEIRKVAV-QQLDNLLND-ELLEYLPQLVQAVKFEWNLESPLV 775
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,082,643
Number of Sequences: 237096
Number of extensions: 1536981
Number of successful extensions: 9014
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9014
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -