Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h07
         (621 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-co...    33   1.1  
BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-...    33   1.1  
AK055159-1|BAB70865.1|  177|Homo sapiens protein ( Homo sapiens ...    33   1.1  
AB208965-1|BAD92202.1|  705|Homo sapiens Rho-associated, coiled-...    33   1.1  
BC050324-1|AAH50324.1|  632|Homo sapiens zinc finger, DHHC-type ...    30   5.7  
AB097035-1|BAC77388.1|  622|Homo sapiens putative MAPK activatin...    30   5.7  
AB097013-1|BAC77366.1|  622|Homo sapiens putative NFkB activatin...    30   5.7  
AB024494-1|BAC22089.1|  633|Homo sapiens huntingtin interacting ...    30   5.7  
AB023163-1|BAA76790.1|  667|Homo sapiens KIAA0946 protein protein.     30   5.7  

>U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-coil
           containing protein kinase p160ROCK protein.
          Length = 1354

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +1

Query: 436 NGAVIAVNFQVANSTQPLKQATNEYKLNSKFYL---RYIEQAPVPDTASYIQKMERDREA 606
           N   I +N+++ +  Q L+Q  NE+K+         + IE+A         +K++ +REA
Sbjct: 667 NNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREA 726

Query: 607 REKGE 621
           REK E
Sbjct: 727 REKAE 731


>BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated,
           coiled-coil containing protein kinase 1 protein.
          Length = 1354

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +1

Query: 436 NGAVIAVNFQVANSTQPLKQATNEYKLNSKFYL---RYIEQAPVPDTASYIQKMERDREA 606
           N   I +N+++ +  Q L+Q  NE+K+         + IE+A         +K++ +REA
Sbjct: 667 NNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREA 726

Query: 607 REKGE 621
           REK E
Sbjct: 727 REKAE 731


>AK055159-1|BAB70865.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30597 fis, clone BRAWH2009261, weakly similar to
           TLM PROTEIN. ).
          Length = 177

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 10/44 (22%), Positives = 28/44 (63%)
 Frame = +2

Query: 23  IIYGCVFYLKIQLVIKFTNVVLIYLNKLIIMQQFTLIFVVHLTA 154
           +++   F + I   +++ NVVL+Y++ +++   FT +  +H+++
Sbjct: 87  LLFFLFFQMNILTGVRYLNVVLVYISLIMVEHFFTYLMAIHMSS 130


>AB208965-1|BAD92202.1|  705|Homo sapiens Rho-associated,
           coiled-coil containing protein kinase 1 variant protein.
          Length = 705

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = +1

Query: 436 NGAVIAVNFQVANSTQPLKQATNEYKLNSKFYL---RYIEQAPVPDTASYIQKMERDREA 606
           N   I +N+++ +  Q L+Q  NE+K+         + IE+A         +K++ +REA
Sbjct: 345 NNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREA 404

Query: 607 REKGE 621
           REK E
Sbjct: 405 REKAE 409


>BC050324-1|AAH50324.1|  632|Homo sapiens zinc finger, DHHC-type
           containing 17 protein.
          Length = 632

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 400 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 579
           G + VI+  +     V A N +  ++    KQ  N + +N   +L+   QA   D  S++
Sbjct: 236 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 292

Query: 580 QKMERDREAREK 615
           +K++ D+E R+K
Sbjct: 293 RKLKADKEFRQK 304


>AB097035-1|BAC77388.1|  622|Homo sapiens putative MAPK activating
           protein protein.
          Length = 622

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 400 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 579
           G + VI+  +     V A N +  ++    KQ  N + +N   +L+   QA   D  S++
Sbjct: 226 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 282

Query: 580 QKMERDREAREK 615
           +K++ D+E R+K
Sbjct: 283 RKLKADKEFRQK 294


>AB097013-1|BAC77366.1|  622|Homo sapiens putative NFkB activating
           protein protein.
          Length = 622

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 400 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 579
           G + VI+  +     V A N +  ++    KQ  N + +N   +L+   QA   D  S++
Sbjct: 226 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 282

Query: 580 QKMERDREAREK 615
           +K++ D+E R+K
Sbjct: 283 RKLKADKEFRQK 294


>AB024494-1|BAC22089.1|  633|Homo sapiens huntingtin interacting
           protein 3 protein.
          Length = 633

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 400 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 579
           G + VI+  +     V A N +  ++    KQ  N + +N   +L+   QA   D  S++
Sbjct: 237 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 293

Query: 580 QKMERDREAREK 615
           +K++ D+E R+K
Sbjct: 294 RKLKADKEFRQK 305


>AB023163-1|BAA76790.1|  667|Homo sapiens KIAA0946 protein protein.
          Length = 667

 Score = 30.3 bits (65), Expect = 5.7
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 400 GLSDVINAWILPNGAVIAVNFQVANSTQPLKQATNEYKLNSKFYLRYIEQAPVPDTASYI 579
           G + VI+  +     V A N +  ++    KQ  N + +N   +L+   QA   D  S++
Sbjct: 271 GNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN---HLQEARQAKGYDNPSFL 327

Query: 580 QKMERDREAREK 615
           +K++ D+E R+K
Sbjct: 328 RKLKADKEFRQK 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,821,408
Number of Sequences: 237096
Number of extensions: 1352437
Number of successful extensions: 2716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2716
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)