Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h06
         (592 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001845-1|AAH01845.1|  421|Homo sapiens chromosome 7 open readi...    77   5e-14
BC000769-1|AAH00769.1|  421|Homo sapiens chromosome 7 open readi...    77   5e-14
AK024820-1|BAB15019.1|  421|Homo sapiens protein ( Homo sapiens ...    77   5e-14
BC029224-1|AAH29224.1|  242|Homo sapiens CCDC42 protein protein.       30   5.3  
AK057296-1|BAB71414.1|  316|Homo sapiens protein ( Homo sapiens ...    30   5.3  
BC042500-1|AAH42500.1|  525|Homo sapiens zinc finger protein 678...    29   9.3  
AL592310-3|CAI21827.1|  227|Homo sapiens zinc finger protein 678...    29   9.3  
AL592310-2|CAI21826.1|  525|Homo sapiens zinc finger protein 678...    29   9.3  
AL451054-4|CAH71932.1|  227|Homo sapiens zinc finger protein 678...    29   9.3  

>BC001845-1|AAH01845.1|  421|Homo sapiens chromosome 7 open reading
           frame 25 protein.
          Length = 421

 Score = 77.0 bits (181), Expect = 5e-14
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
 Frame = +3

Query: 111 VEVVKDKIKFGENLIIQLQPIQHVEGVMKLQRKIKQEIEFLKRLEKSK-NFKIEQLACSN 287
           + + K+ IK  E+L    +    +EG  KL  K+K E++FL+++E  K   K   L  +N
Sbjct: 11  IAIAKELIKRAESLSRSRKG--GIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTN 68

Query: 288 LRHLGSMVECALR-PYVLAVCKTF-HIDNCNK---LIIDIVGDQGNTWTKVIARNPXXXX 452
           L HL ++VE A     V++V   F + D   +   L++D+V + G+TW K I R      
Sbjct: 69  LTHLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALH 128

Query: 453 XXXXXXXXXXARSILDQADDYLKCSKLYPCMYQPPKVVFEFMSGI 587
                      +SI++QA+D+L+ S   P  Y  P ++F F + +
Sbjct: 129 NIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSV 173


>BC000769-1|AAH00769.1|  421|Homo sapiens chromosome 7 open reading
           frame 25 protein.
          Length = 421

 Score = 77.0 bits (181), Expect = 5e-14
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
 Frame = +3

Query: 111 VEVVKDKIKFGENLIIQLQPIQHVEGVMKLQRKIKQEIEFLKRLEKSK-NFKIEQLACSN 287
           + + K+ IK  E+L    +    +EG  KL  K+K E++FL+++E  K   K   L  +N
Sbjct: 11  IAIAKELIKRAESLSRSRKG--GIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTN 68

Query: 288 LRHLGSMVECALR-PYVLAVCKTF-HIDNCNK---LIIDIVGDQGNTWTKVIARNPXXXX 452
           L HL ++VE A     V++V   F + D   +   L++D+V + G+TW K I R      
Sbjct: 69  LTHLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALH 128

Query: 453 XXXXXXXXXXARSILDQADDYLKCSKLYPCMYQPPKVVFEFMSGI 587
                      +SI++QA+D+L+ S   P  Y  P ++F F + +
Sbjct: 129 NIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSV 173


>AK024820-1|BAB15019.1|  421|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21167 fis, clone CAS10861. ).
          Length = 421

 Score = 77.0 bits (181), Expect = 5e-14
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
 Frame = +3

Query: 111 VEVVKDKIKFGENLIIQLQPIQHVEGVMKLQRKIKQEIEFLKRLEKSK-NFKIEQLACSN 287
           + + K+ IK  E+L    +    +EG  KL  K+K E++FL+++E  K   K   L  +N
Sbjct: 11  IAIAKELIKRAESLSRSRKG--GIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTN 68

Query: 288 LRHLGSMVECALR-PYVLAVCKTF-HIDNCNK---LIIDIVGDQGNTWTKVIARNPXXXX 452
           L HL ++VE A     V++V   F + D   +   L++D+V + G+TW K I R      
Sbjct: 69  LTHLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALH 128

Query: 453 XXXXXXXXXXARSILDQADDYLKCSKLYPCMYQPPKVVFEFMSGI 587
                      +SI++QA+D+L+ S   P  Y  P ++F F + +
Sbjct: 129 NIRLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSV 173


>BC029224-1|AAH29224.1|  242|Homo sapiens CCDC42 protein protein.
          Length = 242

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
 Frame = +3

Query: 90  INHAEDLVEVVKDKIKFGENLIIQLQPIQHVEG------VMKLQRKIKQEIEFLKRLEKS 251
           I   EDL E  +  +++GE L+  LQ + +VEG      +  L++K + EI     ++K 
Sbjct: 5   IMEEEDLAEYFR--LQYGERLLQMLQKLPNVEGASESPSIWLLEKKKETEIMHQTMVQKK 62

Query: 252 KNFKIEQLACSNLR 293
           K F+  ++   NLR
Sbjct: 63  KMFQ-RRMETLNLR 75


>AK057296-1|BAB71414.1|  316|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32734 fis, clone TESTI2001180, weakly similar to
           TRICHOHYALIN. ).
          Length = 316

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
 Frame = +3

Query: 90  INHAEDLVEVVKDKIKFGENLIIQLQPIQHVEG------VMKLQRKIKQEIEFLKRLEKS 251
           I   EDL E  +  +++GE L+  LQ + +VEG      +  L++K + EI     ++K 
Sbjct: 5   IMEEEDLAEYFR--LQYGERLLQMLQKLPNVEGASESLSIWLLEKKKETEIMHQTMVQKK 62

Query: 252 KNFKIEQLACSNLR 293
           K F+  ++   NLR
Sbjct: 63  KMFQ-RRMETLNLR 75


>BC042500-1|AAH42500.1|  525|Homo sapiens zinc finger protein 678
           protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +2

Query: 398 GSRQY---MDQSDSKKSKIFICFKCREIFIWSKI 490
           G ++Y   + Q  S KSKIF C +C   F W  I
Sbjct: 78  GQKEYCNRLTQCSSTKSKIFQCIECGRNFSWRSI 111


>AL592310-3|CAI21827.1|  227|Homo sapiens zinc finger protein 678
           protein.
          Length = 227

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +2

Query: 398 GSRQY---MDQSDSKKSKIFICFKCREIFIWSKI 490
           G ++Y   + Q  S KSKIF C +C   F W  I
Sbjct: 133 GQKEYCNRLTQCSSTKSKIFQCIECGRNFSWRSI 166


>AL592310-2|CAI21826.1|  525|Homo sapiens zinc finger protein 678
           protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +2

Query: 398 GSRQY---MDQSDSKKSKIFICFKCREIFIWSKI 490
           G ++Y   + Q  S KSKIF C +C   F W  I
Sbjct: 78  GQKEYCNRLTQCSSTKSKIFQCIECGRNFSWRSI 111


>AL451054-4|CAH71932.1|  227|Homo sapiens zinc finger protein 678
           protein.
          Length = 227

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +2

Query: 398 GSRQY---MDQSDSKKSKIFICFKCREIFIWSKI 490
           G ++Y   + Q  S KSKIF C +C   F W  I
Sbjct: 133 GQKEYCNRLTQCSSTKSKIFQCIECGRNFSWRSI 166


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,225,361
Number of Sequences: 237096
Number of extensions: 1657314
Number of successful extensions: 2968
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2962
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)