Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11h02
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    29   0.19 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    28   0.33 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   3.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   5.3  
Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein prot...    23   9.3  
AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione S-tran...    23   9.3  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 14/75 (18%), Positives = 38/75 (50%)
 Frame = +1

Query: 454 LETQVSELQSKLSELEQKYTDAVKLINQSNQSFHNLQNETKTLQNNSLLLTNELLIKDNK 633
           +E+Q+  L+++L         + K IN+ ++   +   E   +      +   +  +D K
Sbjct: 714 VESQIRGLENRLKYSMNDLETSKKNINEYDRQLEDFTRELDQIGPKISEIERRMQQRDMK 773

Query: 634 IQELEKSNSSLSDEI 678
           IQ++++S +++ D++
Sbjct: 774 IQDIKESMNNVEDDV 788



 Score = 23.0 bits (47), Expect = 9.3
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +1

Query: 457  ETQVSELQSKLSELEQKYTDAVKLINQSNQSFHNLQNETKTLQ 585
            ++   ELQSKL  LE+  T  +K + + ++    +Q+  +  +
Sbjct: 1004 DSLAKELQSKLDTLEKIQTPNMKAMQKLDRVTEKIQSTNEEFE 1046


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
 Frame = +1

Query: 280  DQNHSPPQLASEVNDFDSSPQQKQ-KNSENNNILEENYDNKLLENTLSATE---ILICNE 447
            D  H P  + S  N  +++ ++KQ K +    + EE++ NKL E   S T+   I+    
Sbjct: 1197 DPKHWPKNIESG-NTCETAKEEKQTKTTLTCMVKEESFINKLCERVGSFTKLKRIVAYCH 1255

Query: 448  RKLETQVSELQS--KLSELEQKYTDAVKLINQS--NQSFHNLQNETKTLQNNSLLLTNEL 615
            R  + +    +S  +L EL++     ++L+        +  ++   + ++ + L +   +
Sbjct: 1256 RFFDRKRIHRKSYFELRELKRAEKTIIRLVQNEVYATEYECIKQGQQVVRKSPLRVIRPI 1315

Query: 616  LIKDNKIQELEK-SNSSLSDE 675
            L KDN ++   + SN+ + DE
Sbjct: 1316 LDKDNVMRVGGRLSNADIKDE 1336


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 355  NSENNNILEENYDNKLLENTLSATEILICNERKLETQVSEL 477
            + +NN++LE +   +LL+  +   + L      L+TQ SEL
Sbjct: 1678 DQKNNSVLEVHQVLQLLDTHVEKLDRLFKEFNVLDTQASEL 1718


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/56 (23%), Positives = 22/56 (39%)
 Frame = -1

Query: 412 YFQAAYYRSSPLKYYCFHYFFAFAEETSQNH*LQKLIEVANDFDHSFSDMFLSEHF 245
           +F+  Y +   L  + FH     A      + L +   V  D+D +F   + S  F
Sbjct: 279 FFKKDYQKVQHLALHAFHNTENEAMRAESCYQLARAFHVQRDYDQAFQYYYQSTQF 334


>Z81291-1|CAB03592.1|  209|Anopheles gambiae GSTD1-5 protein
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 463 QVSELQSKLSELEQKYTDAVKLINQSNQSFHNLQNETKTLQNNSLLLT 606
           Q+   Q    E EQK  DAV  +N        +  ++ T+ + S+L T
Sbjct: 115 QIFAKQPANPENEQKMKDAVDFLNTFLDGHKYVAGDSLTIADLSILAT 162


>AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 463 QVSELQSKLSELEQKYTDAVKLINQSNQSFHNLQNETKTLQNNSLLLT 606
           Q+   Q    E EQK  DAV  +N        +  ++ T+ + S+L T
Sbjct: 115 QIFAKQPANPENEQKMKDAVGFLNSFLDGHKYVAGDSLTIADLSILAT 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.314    0.130    0.351 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,784
Number of Sequences: 2352
Number of extensions: 7945
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)