Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g17
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    26   1.1  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   4.3  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       24   5.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   9.8  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   9.8  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = -3

Query: 305 EGIMPYLSNWTSKFNLVIVDGRFQCSTGRSLLNLFWAHNLLDGYLLKGLGSVGDEGLF 132
           E +  Y+S+  + + +V+ D   +    R L N F+ + L   YL++G+    D+G+F
Sbjct: 193 EKVFVYISDLQT-YRMVVYDYANR-RAWRFLHNYFFLNPLEGDYLIQGINFAWDDGIF 248


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +2

Query: 140 PHHLQNPIPSKDNR--PTGYGPRTNLKV 217
           PH LQNP  S++++  PT YG +  LK+
Sbjct: 196 PHRLQNPCYSENDQCEPT-YGFKHRLKI 222


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 284 SNWTSKFNLVIVDGRFQCSTGRSLLNLFW-AHNL-LDGYLLKG 162
           + WT+        G+ Q S G+ + ++FW AH +    YL KG
Sbjct: 50  AQWTATGEPAPKRGKTQKSAGKVMASVFWDAHGIFFIEYLQKG 92


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = -3

Query: 620  ENLAALYHHQPTLVH---LPVSITEHYFRLSSSTSYRSAFV 507
            E+LA  Y +Q   +H    PVS+    FRL  S   R   +
Sbjct: 2016 ESLAINYEYQKNQIHEIHYPVSVKGKRFRLRYSYDNRGKLI 2056


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = -3

Query: 620  ENLAALYHHQPTLVH---LPVSITEHYFRLSSSTSYRSAFV 507
            E+LA  Y +Q   +H    PVS+    FRL  S   R   +
Sbjct: 2017 ESLAINYEYQKNQIHEIHYPVSVKGKRFRLRYSYDNRGKLI 2057


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -1

Query: 673 YIPMAHLDRRRAKTPARWKILL--LSIITSPHLFTSQFL*LSTIFGSPHPLP 524
           Y+P   L +R  KT  RW + +  +S+   PH   S        +GSP  +P
Sbjct: 340 YLPAMLLMKRPRKTRLRWMMEMPGMSVPPQPHTHPS--------YGSPAEIP 383


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 94  SFNTFTPLYNFYLYIFYKTITCFSCR 17
           +F TF PL+ F +Y   +  TC   R
Sbjct: 188 AFITFLPLFGFGVYFDERKQTCVRYR 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,556
Number of Sequences: 2352
Number of extensions: 17804
Number of successful extensions: 46
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)